Scientific agents

681 tagged Scientific, measured the same way as everything else here.

Browse within: prompt-engineering 100agents-md 99Science 93claude-code-plugin 58codex-cli 48ai-research 39antigravity 39biomedical-informatics 32cloudflare-workers 32academic-research 26academic-writing 24ai-coding 22drug-discovery 22tidymodels 22

endocrinologist

49

alxyrgin/health-os

Agent Claude Code

An AI endocrinology assistant for reviewing thyroid, adrenal, reproductive-hormone, insulin, and related laboratory results and symptoms.

not rated 38 24d ago A 119 tokens

backbay-labs/thrunt-god

Agent

Investigates bugs using scientific method, manages debug sessions, handles checkpoints. Spawned by /thrunt:debug orchestrator.

not rated 36 1mo ago A 32 tokens copy · 84% MIT

academic-writer

51

Intersect-Collaborations-LLC/research-workflow-assistant

Agent

Assists with academic manuscript preparation while maintaining strict ICMJE compliance. Scaffolds Quarto documents, manages citations via Zotero, helps draft sections, generates AI disclosure statements, and tracks AI contributions for authorship accountability.

not rated 24 +1 5d ago A 49 tokens original MIT

ed-domain-orienter

52

NikolasMarkou/epistemic-deconstructor

Agent

Phase 0.3 domain-orientation specialist. Runs the five operators (TE term extraction, TG term grounding, MM metrics mapping, AM alias map, CS canonical sources) to construct an auditable glossary, metrics catalog, and source ledger before the analyst commits to hypotheses expressed in unfamiliar jargon. Conditional on…

not rated 23 1mo ago A 89 tokens GPL-3.0

ajhcs/mbse-agents

Agent

Principal medical device SE specializing in IEC 62304 software lifecycle, ISO 14971 risk management, FDA design controls and QMSR, EU MDR technical documentation, and multi-tool MBSE crosswalks for Class II/III and SaMD programs.

not rated 23 4mo ago A 56 tokens original MIT

ml-data-scientist

54

aisingapore/bmad-aisg-aiml

Agent

ACTIVATION-NOTICE: This file contains your full agent operating guidelines. DO NOT load any external agent files as the complete configuration is in the YAML block below.

not rated 22 1y ago A 0 tokens copy · 88% MIT

ml-researcher

55

aisingapore/bmad-aisg-aiml

Agent

ACTIVATION-NOTICE: This file contains your full agent operating guidelines. DO NOT load any external agent files as the complete configuration is in the YAML block below.

not rated 22 1y ago A 0 tokens copy · 84% MIT

yanfang

56

albert-ying/longevity-os

Agent

A laboratory-results agent for reading reports and tracking health markers over time.

not rated 21 5mo ago A 0 tokens

yizheng

57

albert-ying/longevity-os

Agent

An independent review agent for checking proposed N-of-1 self-experiments.

not rated 21 5mo ago A 0 tokens

yuanpan

58

albert-ying/longevity-os

Agent

An agent for designing N-of-1 trials, which are self-experiments involving one person.

not rated 21 5mo ago A 0 tokens

cpuguy96/StepCOVNet

Agent

Status (2026-06-30): Tide gate PASS — scratch iter175 / champion v8. Do not start new tide iter runs unless reproducing. Next AR work: gate-10song-smoke (EXPERIMENTLOG.md § Current phase).

not rated 21 9d ago A 0 tokens original Apache-2.0

ReviewerAgent

61

scitex-ai/emacs-claude-code

Agent

MUST BE USED. Deeply and critically inspect the project from scientific views, just like human reviewers for high impact journals.

not rated 20 23d ago A 28 tokens GPL-3.0

scitex-ai/emacs-claude-code

Agent

MUST BE USED. Knows SciTeX usage with proper formats. Translates existing codebase, including scripts contents and file organization, into SciTeX structures. Not applicable to src or tests but to ./scripts and ./examples. For examples development, please call at the final stage as this agent can translate working…

not rated 20 23d ago A 89 tokens GPL-3.0

dataset-planner

63

BeibaiDraco/maieusis

Agent Claude Code

Scientific dataset-planning agent. Use only for an initialized question branch after the dialogue MCP server exists. Inspects the real dataset and develops a plan without executing the full analysis.

not rated 20 7d ago A 39 tokens original Apache-2.0

paper-writer

64

angadhn/botference

Agent Claude Code

Paper writer — writes or revises journal paper sections. Three modes (from checkpoint's Next Task).

not rated 19 4d ago A 0 tokens original MIT

01_paper_parser

65

qosi-org/arxivist

Agent

Role: You are a scientific paper parsing specialist. Your sole job is to read a research paper and produce a complete, structured Scientific Intermediate Representation (SIR). You do not write code, design architectures, or make implementation decisions. You extract, structure, and annotate.

not rated 19 29d ago A 0 tokens original MIT

qosi-org/arxivist

Agent

Role: You are a scientific auditor. You rigorously compare a user's experimental results against a paper's reported metrics, assess reproducibility, identify hallucinations in the generated implementation, and produce a structured provenance record. You are objective, precise, and do not soften findings.

not rated 19 29d ago A 0 tokens original MIT

wtfp-outliner

67

akougkas/wtf-p

Agent

Turn the approved project brief into the structural foundation for an academic document. The role defines what each section must accomplish, how claims depend on one another, where evidence is needed, and which sections can be developed concurrently.

not rated 18 4d ago A 48 tokens original MIT

imaging

68

omar-A-hassan/medsci-agent

Agent

Standalone specialist for medical image analysis: X-ray, pathology, dermatology.

not rated 18 5mo ago A 14 tokens original MIT

medsci

69

omar-A-hassan/medsci-agent

Agent

Scientific research orchestrator — routes queries to domain MCP toolchains and synthesizes cross-domain results.

not rated 18 5mo ago A 18 tokens original MIT

protein

70

omar-A-hassan/medsci-agent

Agent

Standalone specialist for protein design: sequence analysis, structure prediction, antibody design.

not rated 18 5mo ago A 14 tokens original MIT

council-kahneman

71

gabrielmoreira/agent-skills-mirror

Agent

Council member. Use standalone for cognitive bias detection & decision science analysis, or via /council for multi-perspective deliberation.

not rated 17 today A 35 tokens copy · 100% MIT

ic3-generalizer

72

rupakm/leslie

Agent Claude Code

IC3/PDR generalization step — given one counterexample-to-induction (CTI), propose ONE new invariant conjunct that blocks it and is as weak as possible. Dispatched by /lean4-ic3. Stateless, single-shot, no file edits.

not rated 14 1mo ago A 58 tokens original Apache-2.0

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