329 projects whose own agent configuration covers scientific. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,374Claude Code6,573Data and AI3,706Backend and APIs3,486Languages3,398Planning3,181Git and workflow3,100Code review2,701Memory and context2,354Testing2,311Research2,292DevOps and cloud2,282
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| cyanheads/imf-mcp-server npmjs.com Query IMF SDMX 3.0 macroeconomic data — 193 dataflows, 190 countries, WEO projections, BOP | 1 | Claude Code, Codex, OpenCode | 2 | 13,090 tok |
| zamushwani/biomedical-ai-skills AI agent skills for cancer biology and multi-omics research | 1 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 3,531 tok |
| ZiChenWang114514/cdxml-toolkit-community Community CDXML toolkit and MCP server. | 1 | Claude Code, Codex, OpenCode | 2 | 4,108 tok |
| 263311487-ux/falsify 263311487-ux.github.io The scientific thinking protocol for AI agents — falsify before you believe. 5-stage falsi | 1 | Claude Code, Codex, Cursor, OpenCode | 2 | 280 tok |
| eic/xrootd-mcp-server eic.github.io An MCP server that allows for querying XRootD servers by LLM agents. | 1 | Codex, GitHub Copilot, OpenCode | 2 | 3,032 tok |
| MOBAI547800/abaqus-codex-mcp Codex-ready local MCP server for safe Abaqus automation on Windows | 0 | Codex, OpenCode | 1 | 343 tok |
| colbyw5/openfda-mcp-server Python MCP server that gives AI assistants access to the U.S. Food and Drug Administration | 0 | Codex, OpenCode | 1 | 467 tok |
| sandraschi/leanforge-mcp Lean theorem prover MCP: automated proof search, mathlib integration, job management | 0 | Claude Code, Codex, OpenCode | 2 | 1,889 tok |
| shoumikdc/arXiv-mcp smithery.ai A Model Context Protocol (MCP) server to fetch the latest research papers posted to the ar | 0 | Codex, OpenCode | 1 | 4,099 tok |
| KozakHou/project-bourne Universal experiment provenance and reproducibility for science and engineering. | 0 | Codex, OpenCode | 1 | 3,694 tok |
| MaxMLang/cxg-census-mcp MCP server for CZ CELLxGENE Discover Census. Single-cell RNA-seq queries, ontology-aware ( | 0 | Codex, OpenCode | 1 | 1,128 tok |
| islobodan/cruncher-mcp Cruncher MCP: The Scientific Calculator MCP Server | 0 | Codex, OpenCode | 1 | 1,968 tok |
| starfetch-js/starfetch Starfetch gives AI agents safe, reproducible access to public astronomy catalogs through t | 0 | Codex, OpenCode | 1 | 2,436 tok |
| jsynowiec/mcp-server-airly An MCP server that integrates the Airly API, enabling natural language interaction with ai | 0 | Claude Code, Codex, OpenCode | 2 | 318 tok |
| red-cars-io/clinical-trials-mcp | 0 | Claude Code, Codex, OpenCode | 2 | 5,985 tok |
| u9401066/rootcause-mcp Clinical Root Cause Analysis MCP Server - AI-guided structured RCA with Fishbone (6M), 5-W | 0 | Claude Code, Codex, GitHub Copilot, OpenCode | 51 | 4,716 tok |
| nickzren/mygene-mcp MCP server for MyGene.info API | 0 | Claude Code, Codex, OpenCode | 2 | 590 tok |
| u9401066/academic-figures-mcp Academic figure generation MCP server for AI agents — turn papers into publication-ready m | 0 | Claude Code, Codex, GitHub Copilot, OpenCode | 43 | 2,813 tok |
| AbiyuLingga/LTSpice-MCP | 0 | Claude Code, Codex, OpenCode | 2 | 4,454 tok |
| tetracoralla/math-anchor Math Anchor — safe exact and scientific math, units, and dimensional analysis for humans a | 0 | Claude Code, Codex, OpenCode | 2 | 484 tok |
| ShreeMulay/autoresearch-mcp MCP server for autoresearch technique discovery and experiment tracking. Inspired by Karpa | 0 | Codex, OpenCode | 1 | 524 tok |
| EricYuan2007/GPUPlane Agent-native training control plane for personal GPUs — personal GPU training control plan | 0 | Claude Code, Codex, OpenCode | 5 | 3,555 tok |
| BIH-CEI/zotero-comfort Comfort layer for Zotero MCP integration with high-level research workflows | 0 | Claude Code, Codex, OpenCode | 2 | 333 tok |
| dfieser/lcf-strain-life dfieser.github.io AI-agent-native low cycle fatigue strain-life analysis. Python library plus MCP server: re | 0 | Claude Code, Codex, OpenCode | 3 | 2,570 tok |
| namJeongwan/suparch An open-source MCP server for searching, comparing, and calculating supplement facts. | 0 | Codex, OpenCode | 1 | 63 tok |
| elomokm/paper-hermes MCP Server de veille scientifique — arXiv/ChemRxiv → DeepSeek → Brain Obsidian → Telegram. | 0 | Codex, OpenCode | 1 | 138 tok |
| colbyw5/phenoforge Semantic value set assembly for clinical cohort definitions, over MCP | 0 | Claude Code, Codex, OpenCode | 2 | 898 tok |
| danielk-am/clinical-evidence-mcp Read-only MCP server for cited medical literature, clinical trials, and drug safety data | 0 | Codex, OpenCode | 1 | 263 tok |
| hjsh200219/trading-by-clinical-trial Korean pharma clinical trial intelligence — MCP server + Claude Code plugin. 100-point sco | 0 | Claude Code, Codex, OpenCode | 5 | 2,205 tok |