18 projects whose own agent configuration covers scientific. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,412Data and AI4,299Backend and APIs3,694Languages3,682Planning3,492Git and workflow3,285Code review2,942Memory and context2,581Research2,499Writing and docs2,458Testing2,454Frontend2,420
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorKiroWindsurf
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| ZimoLiao/scholaraio zimoliao.github.io Scholar All-In-One: A research infrastructure for AI agents | 569 | Claude Code, Codex, GitHub Copilot, Cursor, OpenCode | 51 | 2,598 tok |
| equinor/neqsim equinor.github.io NeqSim is a library for calculation of fluid behavior, phase equilibrium and process simul | 150 | Claude Code, Codex, GitHub Copilot, Cursor, OpenCode, Windsurf | 6 | 34,717 tok |
| fuwenhao12/academic-ref-inserter | 55 | Claude Code, Codex, GitHub Copilot, Cursor, Gemini CLI, OpenCode | 6 | 3,753 tok |
| qingzhoupro/afsim-skill AFSIM-SKILL is an AI coding assistant designed for the AFSIM (Advanced Framework for Model | 54 | Claude Code, Cursor | 4 | — |
| nebius/nebius-physical-ai | 27 | Claude Code, Codex, Cursor, OpenCode | 3 | 5,768 tok |
| cpuguy96/StepCOVNet Deep Learning to Create StepMania SM FIles | 22 | Claude Code, Codex, Cursor, OpenCode | 12 | 1,611 tok |
| Hereon-InstituteMS/OASiS OASiS — an open-source agentic framework for verified multi-physics, multi-code simulation | 18 | GitHub Copilot, Cursor | 2 | 1,572 tok |
| open-pgx/openpgx openpgx.ai The open standard for AI-readable pharmacogenomics. MCP Server for personalized drug-gene | 11 | Cursor | 1 | — |
| aryaminus/astro astro-api-a2rc.onrender.com Astrology MCP server & Agent Skill — birth charts, transits, synastry across Western, Vedi | 8 | Claude Code, Codex, GitHub Copilot, Cursor, OpenCode | 4 | 1,589 tok |
| Sounio-lang/sounio sounio.vercel.app Self-hosted systems + scientific programming language with epistemic types, uncertainty pr | 6 | Claude Code, Codex, GitHub Copilot, Cursor, OpenCode | 12 | 15,060 tok |
| AMDResearch/ai4science-studio How-to guides and AMD/ROCm optimization recipes for open AI-for-science models. | 4 | Claude Code, Cursor | 33 | 1,388 tok |
| FilippoScaramuzza/agentic-reviewer An agentic framework for academic paper peer review — a team of AI agents explores a targe | 2 | Claude Code, Codex, Cursor, OpenCode | 15 | 1,493 tok |
| Eklavya-San/CTQ-extraction eklavya-san.github.io AI agent skill for extracting Critical-To-Quality (CTQ) parameters, GD&T feature control f | 2 | Claude Code, Cursor, Gemini CLI | 3 | 231 tok |
| CSOAI-ORG/clinical-trials-ai-mcp Search clinical trials, evaluate eligibility, compare trials, and retrieve endpoint data. | 0 | Cursor | 1 | 82 tok |
| CSOAI-ORG/patient-safety-ai-mcp Check drug interactions, validate dosages, assess patient risk, and generate safety alerts | 0 | Cursor | 1 | 89 tok |
| jbwod/CASDA-MCP Model Context Protocol server for the CSIRO ASKAP Science Data Archive (CASDA). It convert | 0 | Cursor | 4 | — |
| EmaCuvillier/cosmos-mcp | 0 | Cursor | 1 | — |
| 263311487-ux/falsify 263311487-ux.github.io The scientific thinking protocol for AI agents — falsify before you believe. 5-stage falsi | 0 | Claude Code, Codex, Cursor, OpenCode | 2 | 280 tok |