Scientific Agent Skills is a collection of reusable procedures that give AI agents capabilities for scientific research across areas such as biology, chemistry, medicine, and drug discovery. It is used by researchers and by people building AI scientist workflows with compatible coding agents. The catalogue contains many of the project's skills and supporting instructions.
Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add K-Dense-AI/scientific-agent-skills --skill adaptyvgit clone --depth 1 https://github.com/K-Dense-AI/scientific-agent-skillsWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/k-dense-ai/scientific-agent-skills/adaptyv)<a href="https://agentmods.dev/skills/k-dense-ai/scientific-agent-skills/adaptyv"><img src="https://agentmods.dev/badge/skills/k-dense-ai/scientific-agent-skills/adaptyv/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/k-dense-ai/scientific-agent-skills/adaptyv"><img src="https://agentmods.dev/badge/skills/k-dense-ai/scientific-agent-skills/adaptyv.svg" alt="Reviewed on agentmods" width="80" height="20"></a>- Socket pass
- Snyk warn
- NVIDIA SkillSpector pass
What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00086 | $0.03298 |
| Opus 5.5 | $0.00034 | $0.01319 |
| Sonnet 5.5 | $0.00017 | $0.00660 |
| Haiku 4.5 | $0.00009 | $0.00330 |
Grade A, and why
adaptyv scanned grade A with 1 finding against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 14d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Makes network callslowCapability
Not a fault in itself. Listed so you know the mod talks to something, and to what.
curl --fail-with-body 'https://devs.adaptyvbio.com/api/v1/targets?limit=3' \ Copies of this mod
8 near-identical copies found in the catalogue:
- adaptyv — 100% identical, 371 lines differ
- adaptyv — 100% identical, 371 lines differ
- adaptyv — 95% identical, 374 lines differ
- adaptyv — 95% identical, 374 lines differ
- adaptyv — 95% identical, 372 lines differ
- adaptyv — 95% identical, 374 lines differ
- adaptyv — 89% identical, 388 lines differ
- adaptyv — 86% identical, 357 lines differ
How it starts
The opening of the file, as written. The whole thing — 276 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Adaptyv Bio Foundry API
Use this skill to turn protein sequences into experimentally measured data through Adaptyv's cloud laboratory. Confirm the target construct, assay conditions, controls, and replicate plan before submitting a batch; turnaround depends on the experiment.
Reviewed against the deployed OpenAPI schema
(info.version: 0.0.2) and official SDK 0.1.0 at commit
cdf207819ed5a58e0c127453626d2bce125c8064. The schema version alone does not identify
all changes. See the endpoint reference for current
request/response details and discrepancies in upstream examples.
Connect
Base URL: https://devs.adaptyvbio.com/api/v1. The schema is at
/openapi.json; never append that filename to normal endpoint requests.
Create a bearer token in Foundry under
Organization → Settings → Tokens. Use Viewer for reads and Member for experiment
writes. Read credentials from ADAPTYV_API_KEY; the documentation's
FOUNDRY_API_TOKEN is an alternative variable name for the same token. If using a
project .env, explicitly call python-dotenv.load_dotenv() before SDK setup;
the SDK does not load that file automatically. Never print or commit tokens.
# ADAPTYV_API_KEY is already set in the environment.
curl --fail-with-body 'https://devs.adaptyvbio.com/api/v1/targets?limit=3' \
-H "Authorization: Bearer $ADAPTYV_API_KEY"
Resource endpoints require bearer authentication. The schema and liveness endpoint
GET /info/health are public. GET /whoami reports the active organization and
permissions; check it when account scope is unclear.
Python SDK
Install the reviewed revision in your project environment (requires Python 3.11+):
uv pip install "git+https://github.com/adaptyvbio/adaptyv-sdk.git@cdf207819ed5a58e0c127453626d2bce125c8064"
Import from adaptyv, not adaptyv_sdk. FoundryClient requires explicit api_key
and base_url; the lab convenience object reads ADAPTYV_API_KEY and
ADAPTYV_API_URL. Set the latter to the base URL above to override the SDK's
older hostname default.
What ships with it
1 file beside SKILL.md in the same directory: the scripts, references and assets a skill reads on demand. Not counted in the per-session cost; read them before you install if any of them is executable.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 14d ago Changed · +14 lines · -38 tokens per session 5de115067c11
- 15d ago Changed · +4 lines · +11 tokens per session d0e603d3309b
- 1mo ago Changed · +17 lines 2df5e16209d5
- 1mo ago First seen · 241 lines · 113 tokens per session scan A ed2e1f32802c
adaptyv is a skill published in the GitHub repository K-Dense-AI/scientific-agent-skills (50,453 stars, last pushed today), licensed MIT. It adds 86 tokens to every session and 3,298 once invoked, about $0.0003 per session on Opus 5.5. A static security scan graded it A with 1 finding (makes network calls). No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
Other skills, from other repositories
discovery-toolbox
A routed repertoire of 90 scientific thinking operators for biological research agents - visual reasoning, detectability and information budgets, search reframing, causal identification, competing explanations, observation and selection processes, pipeline artifact diagnosis, effort allocation, and confirmation…
discovery-director
Operate as a research director making original discoveries from a given biological question and dataset. Use when the task is open-ended scientific research, exploring omics or experimental data for findings, hypothesis generation and testing, screening a large candidate space of genes, variants, features or…
api-tester
Test and document API endpoints - validate responses, check status, generate examples.
fusecore
Use when creating modules, understanding FuseCore structure, or implementing features in a FuseCore modular-monolith Laravel project.
laravel-architecture
Use when structuring a Laravel project, creating services/repositories/actions, implementing dependency injection, or organizing code layers.
laravel-api
Use when creating API endpoints, transforming responses with API Resources, or handling API authentication, rate limiting, or versioning.