pedrohcgs/claude-code-my-workflow

A ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols.

About the project

claude-code-my-workflow is a forkable setup for using Claude Code to produce and review academic papers, slides, data analyses, and replication packages. Researchers use its agents, skills, rules, hooks, and quality checks to coordinate these tasks and verify their results. The catalogue entries define the reusable workflow components for Claude Code.

This repository also configures its own agents. See what claude-code-my-workflow tells them →

1.6kStars on the repository
86Mods indexed here, across every type
16d agoLast push, which is what freshness is scored on
MITLicence, which decides whether bodies are shown

interview-me

25

pedrohcgs/claude-code-my-workflow

Skill Claude Code

Interactive interview that formalizes a fuzzy research idea into a structured spec (RQ, hypotheses, identification, data needs, empirical strategy). Use when user says "interview me", "help me think through this idea", "I have a half-baked idea", "formalize this into a project", "walk me through framing a study".…

not rated 1.6k +11 16d ago A SkillSpector: pass 103 tokens original MIT

learn

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Extract reusable knowledge from the current session into a persistent skill. Use when you discover something non-obvious, create a workaround, or develop a multi-step workflow that future sessions would benefit from.

not rated 1.6k +11 16d ago B SkillSpector: warn 41 tokens original MIT

lit-review

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Structured literature search + synthesis with citation extraction, thematic clustering, and gap identification. Use when user says "find papers on X", "do a lit review", "what's the literature on...", "summarize what we know about...", "where's the gap in this field", "review recent work on Y". Produces a written…

not rated 1.6k +11 16d ago A SkillSpector: pass 88 tokens original MIT

new-diagram

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pedrohcgs/claude-code-my-workflow

Skill Claude Code needs its repo

Scaffold a new TikZ diagram from the snippet gallery with prevention rules pre-applied (explicit node dimensions, coordinate map, directional edge labels). Compiles standalone, invokes tikz-reviewer with citations from tikz-measurement.md, and loops on revisions until APPROVED.

not rated 1.6k +11 16d ago A SkillSpector: warn 60 tokens original MIT

new-skill

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Scaffold a new skill that follows this repo's conventions — interviews for purpose, trigger phrases, and tool needs, then writes .claude/skills/ /SKILL.md from the skill template with frontmatter and body that pass the integrity gates on first try. Use when user says "write a skill", "scaffold a skill", "create a new…

not rated 1.6k +11 16d ago B SkillSpector: warn 119 tokens original MIT

oracle-review

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Run an external frontier-model referee (Claude Code -> GPT-5.6 Sol Pro via the Oracle CLI) on a paper, proof, estimator, or replication package -- and adjudicate what comes back. Use when the user says "send this to oracle", "get an external review", "run a referee round", "deep-check this proof", or before a…

not rated 1.6k +11 16d ago A SkillSpector: pass 0 tokens original MIT

pedagogy-review

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Holistic pedagogical review of a lecture deck (.qmd or .tex). Checks narrative arc, prerequisite assumptions, worked examples, notation clarity, and deck-level pacing. Use when user says "pedagogy review", "does this teach well?", "is the flow right?", "will students follow?", "review the narrative", or before…

not rated 1.6k +11 16d ago A SkillSpector: pass 90 tokens original MIT

permission-check

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Diagnose why Claude Code is (or isn't) prompting for permission. By default reads only repo-local layers (CLI project, CLI project-local, VSCode workspace). Host-global layers (CLI user /.claude/, VSCode user settings) are read ONLY when the user explicitly confirms — those files may contain unrelated paths or…

not rated 1.6k +11 16d ago B SkillSpector: warn 111 tokens original MIT

power-analysis

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Compute statistical power, required sample size, and minimum detectable effect (MDE) for a study design, then write a registry-ready power section. Handles two-arm RCTs (with clustering / ICC and unequal allocation), multiple-arm corrections, and a simulation-based power option for non-standard designs…

not rated 1.6k +11 16d ago A SkillSpector: warn 150 tokens original MIT

preregister

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Draft a structured preregistration document (OSF, AsPredicted, or AEA RCT Registry style) from a research spec or free-form study description. Output is a Markdown file with hypotheses, design, sampling plan, analysis plan, exclusions, and inference criteria — annotated with MUST / SHOULD / MAY clarity flags. Use when…

not rated 1.6k +11 16d ago A SkillSpector: warn 153 tokens original MIT

promote-memory

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pedrohcgs/claude-code-my-workflow

Skill Claude Code needs its repo

Review candidate learnings in Claude Code's native auto memory (/.claude/projects/ /memory/, machine-local) and run them through a five-critic council in parallel: generality, staleness, redundancy, evidence, format. Majority vote (3+ of 5) promotes the entry to MEMORY.md. Use when user says "promote memory", "review…

not rated 1.6k +11 16d ago A SkillSpector: warn 0 tokens original MIT

proofread

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Read-only proofreading pass over lecture .tex or .qmd files. Checks grammar, typos, overflow, terminology consistency, and academic writing quality; produces a report without editing. Use when user says "proofread", "check for typos", "look for grammar issues", "copy-edit this", "any writing errors?", or before a…

not rated 1.6k +11 16d ago A SkillSpector: pass 77 tokens original MIT

qa-quarto

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pedrohcgs/claude-code-my-workflow

Skill Claude Code needs its repo

Adversarial Quarto-vs-Beamer parity QA. A critic agent compares the Quarto HTML render to the Beamer PDF benchmark for content/visual parity; a fixer agent applies fixes; loops until APPROVED (max 5 rounds). Use when user says "qa the quarto", "check parity", "does the html match the pdf?", "quarto matches beamer?"…

not rated 1.6k +11 16d ago A SkillSpector: pass 105 tokens original MIT

r-package-check

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Run the full R package release gate — regenerate docs, run the test suite, run R CMD check --as-cran, and triage every ERROR / WARNING / NOTE against CRAN policy before a release or submission. Use when the user says "check my R package", "R CMD check", "is this package CRAN-ready", "run devtools::check", "prepare for…

not rated 1.6k +11 16d ago A SkillSpector: pass 113 tokens original MIT

replication-package

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Assemble a submission-ready replication package to the AEA Data and Code Availability Standard (DCAS) / openICPSR / Social Science Reproduction Platform expectations — standard replication README, dataset manifest, computational-requirements capture, a Table/Figure → script:line map, and a confidential-data deposit…

not rated 1.6k +11 16d ago A SkillSpector: warn 145 tokens original MIT

research-ideation

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Generate structured research questions, testable hypotheses, and candidate empirical strategies from a topic, phenomenon, or dataset description. Use when user says "give me research ideas on X", "brainstorm questions about Y", "what could I study with this data?", "I'm looking for a paper idea on...", "generate…

not rated 1.6k +11 16d ago A SkillSpector: pass 89 tokens original MIT

respond-to-eval

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Turn student course evaluations (free-text + numeric) into an actionable teaching-improvement plan — the teaching analogue of /respond-to-referees. Clusters comments into themes, separates signal from noise, classifies each theme Keep / Change / Investigate / Out-of-scope, and drafts concrete changes mapped to the…

not rated 1.6k +11 16d ago A SkillSpector: warn 111 tokens original MIT

respond-to-referees

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Generate a structured response-to-referees document from a referee report and the revised manuscript. Maps each referee comment to the specific revision, classifies coverage (addressed / partially / deferred / disagreement), and drafts polite but firm responses. Use during the R&R (revise-and-resubmit) stage of paper…

not rated 1.6k +11 16d ago A SkillSpector: warn 70 tokens original MIT

review-paper

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pedrohcgs/claude-code-my-workflow

Skill Claude Code needs its repo

Comprehensive manuscript review with three modes: single-pass (default), --adversarial critic-fixer loop, and --peer [journal] simulated peer-review pipeline (editor + 2 dispositioned referees + editorial decision, calibrated to a target journal). R&R continuation via --peer --r2/--r3; hostile-editor stress test via…

not rated 1.6k +11 16d ago A SkillSpector: warn 114 tokens original MIT

review-r

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Read-only R code review protocol for .R scripts. Checks code quality, reproducibility, domain correctness, tidyverse idioms, and professional standards; produces a report without editing. Use when user says "review this R script", "check the R code", "audit the analysis code", "code review on the R", or when an R file…

not rated 1.6k +11 16d ago A SkillSpector: pass 102 tokens original MIT

scaffold-exercises

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Scaffold a graded problem set with sections, problems, worked solutions, and short "why this matters" explainers across analytical, empirical, and coding types. Use when user says "make a problem set on X", "scaffold exercises for this lecture", "create practice problems", "generate homework with a solution key"…

not rated 1.6k +11 16d ago A SkillSpector: warn 101 tokens original MIT

seven-pass-review

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pedrohcgs/claude-code-my-workflow

Skill Claude Code needs its repo

Mechanize Pattern 15 — the seven-pass adversarial review protocol for academic manuscripts. Spawns 7 forked subagents in parallel (abstract, intro, methods, results, robustness, prose, citations), then synthesizes a prioritized revision checklist. Use for submission-ready or R&R-stage papers where single-pass review…

not rated 1.6k +11 16d ago A SkillSpector: warn 70 tokens original MIT

simulation-study

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pedrohcgs/claude-code-my-workflow

Skill Claude Code

Scaffold and run a reproducible Monte Carlo simulation study in R — a declared assumption regime, a parameterized DGP, an estimator grid, a seeded replication loop, and a summary of bias, RMSE, empirical SE, coverage, size/power with Monte Carlo standard errors. Use when the user says "run a Monte Carlo simulation"…

not rated 1.6k +11 16d ago A SkillSpector: pass 148 tokens original MIT

slide-excellence

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pedrohcgs/claude-code-my-workflow

Skill Claude Code needs its repo

Multi-agent comprehensive slide review (visual + pedagogy + proofreading, plus TikZ / parity / substance conditionally). Use when user says "full review", "excellence pass", "comprehensive check", "review everything", "pre-release review", "slide excellence", or before teaching / shipping a deck. Fanout wrapper — for…

not rated 1.6k +11 16d ago A SkillSpector: pass 94 tokens original MIT

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