Skill Claude CodeCodex
Use when working on bioinformatics workflows such as alignment, variant calling, phylogenetics, or protein-structure analysis, especially across BLAST, minimap2, samtools, bcftools, MAFFT, IQ-TREE, or ESMFold.
127 tagged agentic search, measured the same way as everything else here.
Browse within: chinese-search 55deep-research 55research-agent 55agentic-science 47computational-research 47research-workflow 47scientific-computing 47codex-skills 14llms-txt 14schema-org 14Document Ingestion 6gemini-api 6knowledge-base 6
Skill Claude CodeCodex
Use when working on bioinformatics workflows such as alignment, variant calling, phylogenetics, or protein-structure analysis, especially across BLAST, minimap2, samtools, bcftools, MAFFT, IQ-TREE, or ESMFold.
Skill Claude CodeCodex
Use when the user wants to draft a literature review, survey a research area, summarize a field, organize workspace papers, identify gaps, or export review references.
Skill Claude CodeCodex
Use when evaluating, adding, or upgrading ScholarAIO support for a scientific computing tool, especially integration-gate review, official docs ingestion, toolref integration, lightweight skill design, and end-to-end CLI verification.
yoloshii/gigaxity-deep-research
Skill Claude CodeCodex
Deep research MCP server wrapping Qwen3-30B-A3B-Thinking via OpenRouter. Use when an agent needs cross-source synthesis with citations, exploratory expansion of an unfamiliar topic, chain-of-thought reasoning over evidence, or fast conversational lookups grounded in live web search. Exposes six MCP tools — two…
yoloshii/gigaxity-deep-research
Skill Claude CodeCodex
This skill should be used when the user asks research questions, needs information lookup, wants comparisons, asks "what is", "how does", "explain", "compare", "best practices", "latest developments", or any query requiring web search, documentation lookup, or synthesis of multiple sources. Provides optimal routing…
Skill Claude CodeCodex
Group-first channel selection algorithm for v2 tool-supplier architecture. Given a research query + clarify rubrics + channelpriority hints, picks 1-3 relevant groups from the router index, then 3-8 leaf channels from within those groups. Replaces flat-rank selection across 41 channels with a two-stage pick so runtime…
Skill Claude CodeCodex
Deduplicate URLs across all sources, assign stable citation numbers, and merge citations from multiple subagents / sections into one consistent reference list. Prevents "same URL cited as [3] in one paragraph and [17] in another" and "different URLs merged under [5]" bugs that come from per-section synthesis.
Skill Claude CodeCodex
Session-level policy for keeping the runtime AI's context window healthy across long research — keep-last-k tool results, offload older evidence to disk, trigger compaction at thresholds. Borrows MiroThinker's keeptoolresult, deepagents' summarization middleware, and deer-flow's SummarizationEvent pattern. Orthogonal…
sergekostenchuk/seo-llm-skill-cluster
Skill Claude CodeCodex
Review public site content for editorial quality, source support, prompt residue, duplicate blocks, translation drift, hidden filler, and human usefulness before SEO or LLM-friendly publication. Use this skill when the user asks to quality-gate news briefs, longform explainers, blog posts, topic pages, project pages…
sergekostenchuk/seo-llm-skill-cluster
Skill Claude CodeCodex
Convert a semantic core into crawlable SEO and LLM-friendly information architecture. Use this skill when the user asks for URL structure, page taxonomy, canonical rules, hreflang groups, page roles, pillar/topic/news/article/blog/project separation, multilingual route strategy, or a durable content model such as one…
sergekostenchuk/seo-llm-skill-cluster
Skill Claude CodeCodex
Design intentional internal link graphs for SEO, UX, and LLM-readable sites. Use this skill when the user asks for links between short briefs, longform articles, topics, projects, author pages, breadcrumbs, source trails, related stories, orphan-page checks, overlink checks, anchor intent, or validation that a link…
Skill Claude CodeCodexGemini CLI
Retrieves implementation knowledge, code examples, and documentation references. Use to inform technical decision-making when the user requires specific library usage, framework patterns, or syntax details. Trigger on requests to 'search docs', 'find code examples', or 'check implementation details'.
Skill Claude CodeCodexGemini CLI
Performs dynamic, reflective problem-solving through iterative thought chains. Use for complex planning requiring revision, branching, backtracking, or hypothesis verification. Ideal for multi-step analysis where context maintenance is required or the full scope isn't initially clear.
Skill Claude CodeCodexGemini CLI
Generates technical implementation plans and architectural strategies that enforce the Project Constitution. Use when designing new features, starting implementation tasks, refactoring code, or ensuring compliance with critical standards like Testability-First Architecture, security mandates, testing strategies, and…
Skill Claude CodeCodex
Orchestrate UI direction, composition, motion provider selection, implementation, and browser-proven quality for polished frontend work. Use when Codex needs to improve a visual surface with animation or interactive polish; when a request mixes design intent, component choice, browser validation, accessibility, or…
bsisduck/google-search-ads-analytics-docs
Skill Claude CodeCodex
This skill should be used when the user asks about Google Search (SEO), Google Search Console, Google Ads, or Google Analytics 4 (GA4) - including SEO, crawling/indexing, robots.txt, sitemaps, structured data / rich results, Search Console reports (index coverage, performance, Core Web Vitals), Google Ads…
bsisduck/google-search-ads-analytics-docs
Skill Claude CodeCodex
This skill should be used when the user asks to "audit my page/site/repo", "scan for SEO", "check structured data / rich results", "is my page Google-ready", "SEO audit", "Google scanner", or wants prioritized, cited recommendations to improve a page in Google Search. It runs a full multi-agent SEO / discoverability…