23 tagged ai4curation, measured the same way as everything else here.
Browse within: monarchinitiative 23functional-annotation 15geneontology 15obofoundry 7
Skill Claude CodeCodex
Work with BioReason-Pro predictions and reasoning traces for protein function. Use when: comparing BioReason outputs against curated reviews, converting web exports to YAML, reviewing reasoning trace quality, or running the SFT/RL comparison. Triggers: "bioreason", "GO-GPT predictions", "reasoning trace review"…
Skill Claude CodeCodex
Use ONLY when the user explicitly asks to orchestrate parallel external agents (Codex or Claude Code) in tmux sessions via tp (tmux-pilot). Or when a user tells you that you're the boss or orchestrator. You can also use this if you are an operclaw agent. NEVER auto-invoke for a generic "do this in parallel" request.…
Skill Claude CodeCodex
Use this agent when you need to review UniProt annotation rules (ARBA, UniRule) for quality, biological accuracy, and GO annotation appropriateness. This agent performs comprehensive analysis of rule condition sets, evaluates literature support, assesses taxonomic scope, and recommends curation actions.
Skill Claude CodeCodex
Skill to assist with how a GitHub repository is configured with GitHub integrations, including instructions for agents in markdown (AGENTS and CLAUDE), github actions for invoking agents, and specific localization procedures such as defining claude/codex skills, or claude subagents. The skill helps with both technical…
Skill Claude CodeCodex
Skills for understanding and applying DOSDP (Dead Simple Ontology Design Patterns) to ensure consistent ontology term creation and maintenance. This skill is about recognizing patterns and ensuring consistency, not using dosdp-tools directly.
Skill Claude CodeCodex
Skills for using ROBOT, the OBO ontology command-line toolkit for reasoning, template-based term creation, quality control, format conversion, and ontology manipulation. Use this when working with OWL/OBO ontologies that need automated processing.
Skill Claude CodeCodex
Guide for creating new GitHub repos and best practice for existing GitHub repos, applicable to both code and non-code projects.