add-tool
01Skill Claude CodeCodex
Scaffold a new MCP tool definition. Use when the user asks to add a tool, create a new tool, or implement a new capability for the server.
68 tagged ncbi, measured the same way as everything else here.
Browse within: Entrez 31evidence-based-medicine 31literature-search 31bioinformatics 5
Skill Claude CodeCodex
Scaffold a new MCP tool definition. Use when the user asks to add a tool, create a new tool, or implement a new capability for the server.
Skill Claude CodeCodex
Design the tool surface, resources, and service layer for a new MCP server. Use when starting a new server, planning a major feature expansion, or when the user describes a domain/API they want to expose via MCP. Produces a design doc at docs/design.md that drives implementation.
Skill Claude CodeCodex
Ship a release end-to-end across every registry the project targets (npm, MCP Registry, GitHub Releases for .mcpb bundles, GHCR). Runs the final verification gate, pushes commits and tags, then publishes to each applicable destination. Assumes git wrapup (version bumps, changelog, commit, annotated tag) is already…
Skill Claude CodeCodex
Orchestrate pre-commit workflow including Memory Bank sync, README/CHANGELOG/ROADMAP updates, and MCP tool count sync. Triggers: GIT, gc, push, commit, 提交, 準備 commit, 要提交了, git commit, pre-commit, 推送.
Skill Claude CodeCodex
MCP tools for PDF ingestion → extract figures, tables, sections → build knowledge graph. Transforms PDF into queryable assets (images, tables, text) with cross-document RAG. Triggers: PDF, ingest, extract, 圖片, 表格, figure, table, manifest, knowledge graph, 知識圖譜, RAG, 文獻分析.
Skill Claude CodeCodex
Generate comprehensive test suites including static analysis, unit tests, integration tests, E2E tests, and coverage reports. Triggers: TG, test, 測試, 寫測試, coverage, 覆蓋率, pytest, unittest, 驗證.
Skill Claude CodeCodex
Multi-step bioinformatics analysis workflow using BioMCP — data type detection, tool recommendation, cross-database validation, and honest insight generation. Use when the user provides raw bio data (gene list, sequence, variant, compound, IDs) and wants analysis or insights.
Skill Claude CodeCodex
Match raw bioinformatics data to the right databases and tools. For each data type gives a ranked list of suitable databases, expected outputs and insights, with two paths — let the intelligentanalyze agent decide, or call the specific tools directly yourself. Use whenever the user asks "what can I do with this data".
Skill Claude CodeCodex
How to query the 36 BioMCP databases effectively — tool selection per data type, NCBI rate limits, honest verification. Use whenever a task involves literature search, sequences, structures, enrichment, interactions, compounds, omics data, or the intelligentanalyze agent.