opentargets
529MCP server Claude CodeCodexCursor +2
MCP server for Open Targets Platform biomedical data access. Runs locally from the opentargets-mcp Python package.
not rated 19 28d ago A
tokens not measured
original MIT
arxivist
530Skill Claude CodeCodex
ArXivist is a multi-agent orchestration skill that converts scientific papers (arXiv PDFs or URLs) into fully executable, reproducible Git repositories through a structured pipeline. Use this skill whenever a user mentions: converting a paper to code, reproducing a research paper, implementing an arXiv paper, turning…
not rated 19 13d ago A 178 tokens
original MIT
Skill Claude CodeCodex
An ophthalmology interview helper that turns a patient's main eye-related complaint into structured clinical information and suggests the fewest necessary follow-up questions. Ophthalmology is the medical specialty focused on the eyes.
not rated 19
+1 3mo ago A 25 tokens
MCP server Claude CodeCodexCursor +2
Rosetta/PyRosetta protein modeling and Biotite translation for computational biology. Runs locally from the rosetta-mcp-server npm package. Needs 3 environment variables to run.
not rated 19 7mo ago A
tokens not measured
Skill Codex
Use when working in Xu Zilong academic projects with Data/Program/Results/Manuscripts/Submissions and needing stable interfaces between generated results, hand-edited manuscript inserts, and submission artifacts.
not rated 19 7mo ago A 47 tokens
plantontology
534MCP server Claude CodeCodexCursor +2
MCP server "plantontology" as configured in AlexAI-MCP/PlantOntology. Runs locally from the plantontology Python package.
not rated 19
+1 6mo ago A
tokens not measured
viznoir
535Plugin Claude Code
Bundles 9 skills, 1 command, 3 agents, 1 MCP server · 1,014 tokens together
CAE post-processing plugin for AI coding assistants. Headless VTK rendering, mesh analysis, and automated report generation for CFD/FEA researchers.
not rated 19 4d ago A
tokens not measured
original MIT
BerkKilicoglu/google-health-fitbit-mcp
MCP server Claude CodeCodexCursor +2
Privacy-first Google Health API MCP server for health, sleep, activity and HR agents. Runs locally from the google-health-fitbit-mcp npm package. Needs 8 environment variables to run.
not rated 19 3mo ago A
tokens not measured
original MIT
sdrf-skills
537Plugin Claude Code
Bundles 4 skills, 2 hooks, 1 MCP server · 251 tokens together
SDRF annotation skills — expert-level proteomics metadata workflows for AI assistants.
not rated 19
+1 11d ago A
tokens not measured
original MIT
kisti-mcp
538MCP server Claude CodeCodexCursor +2
KISTI-MCP Server - MCP server for KISTI OpenAPI (ScienceON, NTIS, DataON). Runs locally from the kisti-mcp Python package.
not rated 19 4mo ago A
tokens not measured
paper-sharpener
539Plugin Claude Code
Bundles 4 skills · 540 tokens together
Academic paper review, writing improvement and recommendation-letter skills for Claude Code.
not rated 19
changed 16d ago A
tokens not measured
BESSER-PEARL/research-agent-skills
Skill Claude CodeCodex
Review and analyze academic research papers. Use this skill when the user asks to review a paper, analyze a publication, summarize research, critique methodology, extract key findings, compare papers, check for numerical inconsistencies, or assess novelty and contributions of academic work. Also triggers when the user…
not rated 18 17d ago A 87 tokens
original MIT
shibuiwilliam/mcp-server-scikit-learn
MCP server Claude CodeCodexCursor +2
MCP server "mcp-server-scikit-learn" as configured in shibuiwilliam/mcp-server-scikit-learn. Runs locally from the mcp-server-scikit-learn Python package.
not rated 18 1y ago A
tokens not measured
original MIT
article-mcp
542MCP server Claude CodeCodexCursor +2
A local search server for academic articles, using sources such as Europe PMC and arXiv. It is configured to run through the article-mcp Python package.
not rated 18
+1 10mo ago A
tokens not measured
original MIT
ronantakizawa/gis-dataconversion-mcp
MCP server Claude CodeCodexCursor +2
An MCP server for converting GIS data in different formats. Runs locally from the gis-dataconversion-mcp npm package.
not rated 18 1y ago A
tokens not measured
original MIT
dazhiyang/scientific-plotting-skill
Skill Claude CodeCodex
Use when the user asks to plot for the paper, make a manuscript or journal figure, export a publication or thesis PDF, or prepare supplementary vector graphics—in R with ggplot2 only or Python with plotnine only. Enforces vector PDF, 85 mm and 180 mm widths, one Times text size with no plot title, Wong discrete…
not rated 18 6mo ago A 104 tokens
original MIT
geo-mcp
545MCP server Claude CodeCodexCursor +2
A Model Context Protocol (MCP) server for accessing GEO (Gene Expression Omnibus) data through NCBI E-Utils API. Runs locally from the geo-mcp Python package.
not rated 18 6mo ago A
tokens not measured
original BSD-3-Clause
Skill Claude CodeCodex
Use this skill when both of these are present: (1) a night or time reference — "tonight", "tomorrow", "this weekend", "Saturday night", or any specific date; (2) observing intent — stargazing, skywatching, telescope or binocular use, wanting to know what's visible or "up", asking whether a specific object (planet…
not rated 18
+1 3mo ago A 174 tokens
original MIT
sagemath
547Plugin Gemini CLI
Stateful SageMath computations: symbolic calculus, number theory, linear algebra, graphs, groups, elliptic curves, plotting and claim verification.
not rated 18
changed 10d ago A
tokens not measured
original MIT
highs-mcp
548MCP server Claude CodeCodexCursor +2
A Model Context Protocol (MCP) server that provides linear programming (LP) and mixed-integer programming (MIP) optimization capabilities using the HiGHS solver. Runs locally from the highs-mcp npm package.
not rated 17 1y ago A
tokens not measured
original MIT
Skill Codex
Use when a task requires applying Honeybee Energy or Radiance properties through the unified apply bus, including room attributes, HVAC, room loads, schedules, modifiers, modifier sets, sensor grids, views, and facade constructions.
not rated 17 8mo ago A 53 tokens
GPL-3.0
proteomics
550MannLabs/proteomics-agent-skills
Plugin Claude Code
Bundles 11 skills · 689 tokens together
Transform proteomics search-engine output tables into high-confidence biological insights using best practices: data reading, quality control, normalization, imputation, batch-effect correction, differential expression analysis, and biological interpretation.
not rated 17
+1 23d ago A
tokens not measured
original Apache-2.0
GEUConn/research-idea-workflow-skill
Skill Claude CodeCodex
This skill guides materials engineering researchers through four structured stages — from a raw idea to a fully planned experiment — with human-in-the-loop confirmation at each critical checkpoint.
not rated 17 5mo ago A 0 tokens
original MIT
Skill Claude Code
Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for actual review writing, manuscript revision. For evaluating…
not rated 17 4mo ago A 74 tokens
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: