Scientific

15,345 mods in this category, of every kind an agent can take. Each one carries what it costs per session, what the scan found, and whether it is the original.

watertap-engine-mcp

1417

puran-water/watertap-engine-mcp

MCP server Claude CodeCodexCursor +2

MCP server "watertap-engine-mcp" as configured in puran-water/watertap-engine-mcp. Runs locally from the watertap-engine-mcp Python package.

not rated 1 6mo ago A tokens not measured archived

scholaragent

1418

byBasiliosP/RLM-Agent

MCP server Claude CodeCodexCursor +2

Multi-agent scientific literature research system with persistent memory. Runs locally from the scholaragent Python package.

not rated 1 3mo ago A tokens not measured original MIT

latexmk-mcp

1419

coolport/latexmk-mcp

MCP server Claude CodeCodexCursor +2

MCP server for the latexmk LaTeX build tool. Runs locally from the latexmk-mcp npm package.

not rated 1 5mo ago A tokens not measured original MIT

ml-research-workflow

1420

zhyx12/projtool

Skill Claude CodeCodex

Use this skill whenever the user is doing ML experiment work in a projtool-managed repo — that is, requests involving training, runs, manifests, reports, mutagen sync, AutoDL instances, GPU provisioning, experiment branches, worktrees, image builds, research threads / lineage / the docs registry, or projtool tool…

not rated 1 1mo ago A 206 tokens original MIT

manim-server

1421

sagebynature/manim-server

MCP server Claude CodeCodexCursor +2

MCP server "manim-server" as configured in sagebynature/manim-server. Runs locally from the manim-server Python package.

not rated 1 5d ago A tokens not measured original MIT

rag-paper-query

1422

i1ight/ragPaper

Skill Claude CodeCodex

Use when the user asks to search, inspect, summarize, compare, cite, or reason over locally indexed paper PDFs in rag-paper via MCP tools or direct local Chroma/rag-paper access.

not rated 1 1mo ago A 43 tokens original MIT

medrxiv-mcp

1423

yogsoth-ai/medrxiv-mcp

MCP server Claude CodeCodexCursor +2

MCP server "medrxiv-mcp" as configured in yogsoth-ai/medrxiv-mcp. Runs locally from the medrxiv-mcp Python package.

not rated 1 2mo ago A tokens not measured original Apache-2.0

catalogo-bioquimica

1424

FelipeMv2301/MCP-Catalogo-BQ

MCP server Claude CodeCodexCursor +2

MCP server "catalogo-bioquimica" as configured in FelipeMv2301/MCP-Catalogo-BQ. Runs server.py with python3. Needs 1 environment variable to run.

not rated 1 1mo ago A tokens not measured

arxiv-daily-mcp

1425

nerin81-netizen/arxiv-daily-mcp

MCP server Claude CodeCodexCursor +2

MCP server "arxiv-daily-mcp" as configured in nerin81-netizen/arxiv-daily-mcp. Runs locally from the arxiv-daily-mcp Python package.

not rated 1 2mo ago A tokens not measured original MIT

mpilot

1426

davezfr/mpilot

MCP server Claude CodeCodexCursor +2

MPilot is a plugin-based, environmental modeling framework. Runs locally from the mpilot Python package.

not rated 1 5d ago A tokens not measured original MIT

kratos-mcp-server

1427

loumalouomega/Kratos-MCP-Server

MCP server Claude CodeCodexCursor +2

MCP server for Kratos Multiphysics: scaffold, run and post-process finite element simulations. Runs locally from the kratos-mcp-server Python package.

not rated 1 12d ago A tokens not measured original MIT

qfoldit-skills

1428

qfoldit/Protein-Design-MCP

Plugin Claude Code

Bundles 20 skills · 2,860 tokens together

Twenty Claude skills for qFoldIT: scientific simulation (VQE, protein folding, bio-mining, corrosion, MEOR, prospecting, plant growth, plastic pyrolysis, L-systems, NanoVer VR bridge, BioNeMo structure prediction) plus digital-twin/engine adapters (Unreal, Unity, Unigine, OpenUSD/Omniverse, Apple RealityKit/visionOS…

not rated 1 17d ago A tokens not measured original Apache-2.0

pubmed-mcp

1429

dam2452/pubmed-mcp

MCP server Claude CodeCodexCursor +2

MCP server "pubmed-mcp" as configured in dam2452/pubmed-mcp. Runs locally from the pubmed-mcp Python package.

not rated 1 2mo ago A tokens not measured

weather

1430

Leonwjj/mcps

MCP server Claude CodeCodexCursor +2

One of 2 in .mcp.json

MCP server "weather" as configured in Leonwjj/mcps. Runs dist/weather/index.js with node.

not rated 1 1mo ago A tokens not measured

petro-mcp

1431

tallihealth/petro-mcp

MCP server Claude CodeCodexCursor +2

MCP server for petroleum engineering calculations. Runs locally from the petro-mcp Python package.

not rated 1 5mo ago A tokens not measured original MIT

crc-lnm-medical-agent

1432

jiziyun149-cpu/crc-lnm-medical-agent

MCP server Claude CodeCodexCursor +2

Full-lazy single-model CRC-LNM research-assistance MCP for ModelScope STDIO. Runs locally from the crc-lnm-medical-agent Python package.

not rated 1 1mo ago A tokens not measured

abacus-equation

1433

Enthusiasm23/abacus

Skill Claude CodeCodex

A set of tools for creating formulas, solving equations, calculating results, and diagnosing formula errors.

not rated 1 1mo ago A 33 tokens

cictikz

1434

wulffern/cictikz

MCP server Claude CodeCodexCursor +2

AI-driven TikZ circuit schematics: symbol library, renderer, linter, MCP server, xschem bridge. Runs locally from the cictikz Python package.

not rated 1 1mo ago A tokens not measured original MIT

dr-cost-estimator-mcp

1435

aws-samples/sample-dr-cost-estimator-mcp

MCP server Claude CodeCodexCursor +2 ✓ vendor

MCP server "dr-cost-estimator-mcp" as configured in aws-samples/sample-dr-cost-estimator-mcp. Runs locally from the dr-cost-estimator-mcp Python package.

not rated 1 1mo ago A tokens not measured MIT-0

flowproof-mcp

1436

ajibadedapo/flowproof-mcp

MCP server Claude CodeCodexCursor +2

Run reproducible bioinformatics pipelines from an AI assistant over MCP, with verifiable provenance. Runs locally from the flowproof-mcp Python package.

not rated 1 26d ago A tokens not measured original MIT

mathmethods-mcp

1437

agmonetti/mathmethods-mcp

MCP server Claude CodeCodexCursor +2

MCP server exposing numerical methods tools: root finding, integration, ODEs, interpolation, Monte Carlo, and dynamical systems. Runs locally from the @agmonetti/mathmethods-mcp npm package.

not rated 1 changed 2d ago A tokens not measured original MIT

menessss/medical-evidence-assistant

MCP server Claude CodeCodexCursor +2

MCP server "medical-evidence-assistant" as configured in menessss/medical-evidence-assistant. Runs locally from the medical-evidence-assistant Python package.

not rated 1 1mo ago A tokens not measured original MIT

carbs

1439

ferre-z/carbs

MCP server Claude CodeCodexCursor +2

A package for Guidance, Navigation, and Control (GNC) for Autonomous Swarms Using Random finite sets (RFS). Runs locally from the carbs Python package.

not rated 1 27d ago A tokens not measured original MIT

ras-end-to-end

1440

Zhonghao1995/Agentic-HEC-RAS

Skill Claude CodeCodex

Standard operating procedure for an auditable, headless HEC-RAS workflow via the hec-ras MCP server — how to plan, copy, edit boundaries, run, QA-gate, read results, compare, plot, audit, and safely stop. Use FIRST whenever an agent is handed a HEC-RAS project (.prj folder) or a results file (.p##.hdf) plus a…

not rated 1 28d ago A 113 tokens original MIT

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: