681 projects whose own agent configuration covers scientific. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,412Data and AI4,299Backend and APIs3,694Languages3,682Planning3,492Git and workflow3,285Code review2,942Memory and context2,581Research2,499Writing and docs2,458Testing2,454Frontend2,420
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorKiroWindsurf
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| Noi1r/beamer-skill A Claude Code skill for creating, compiling, reviewing, and polishing academic Beamer LaTe | 343 | GitHub Copilot | 1 | 1,448 tok |
| ucam-eo/geotessera Python library for the Tessera embeddings | 342 | GitHub Copilot | 1 | 2,084 tok |
| topocm/topocm_content topocondmat.org Course on topology in condensed matter | 334 | Codex, OpenCode | 1 | 174 tok |
| OpenRaiser/PaperFit openraiser.github.io 📄 [Skill] Vision-in-the-loop LaTeX typesetting agent — auto-compile, render, diagnose, an | 333 | Claude Code | 10 | 4,804 tok |
| microprediction/precise microprediction.github.io Online Covariance and Correlation Estimation | 333 | Claude Code | 5 | — |
| K-Dense-AI/science-superpowers k-dense.ai Composable computational-science methodology skills for AI research agents — pre-registrat | 318 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 688 tok |
| raygon-renderer/thermite raygon-renderer.github.io Thermite SIMD: Melt your CPU | 317 | Claude Code | 1 | — |
| csml-rpi/Foam-Agent arxiv.org Foam-Agent: An end-to-end, composable multi-agent framework for automating CFD simulations | 314 | Codex, OpenCode | 1 | 1,630 tok |
| brycewang-stanford/StatsPAI StatsPAI is the first Agent-native Python library for causal inference and applied econome | 309 | Claude Code | 1 | 9,485 tok |
| safety-research/automated-w2s-research | 304 | Claude Code | 5 | — |
| utilForever/CubbyFlow cubbyflow.github.io Voxel-based fluid simulation engine for computer games | 300 | Codex, OpenCode | 1 | 4,114 tok |
| AtomFlow-AI/MoleCode arxiv.org Molecode presents molecules as code and enables LLMs to operate and reason on chemistry di | 299 | Claude Code, Codex, OpenCode | 2 | 847 tok |
| apache/texera texera.apache.org Human-AI Collaborative Data Science Using Visual Workflows | 299 | Claude Code, Codex, OpenCode | 2 | 3,388 tok |
| Sibyl-Research-Team/AutoResearch-SibylSystem Fully Autonomous AI Research System with Self-Evolution, built natively on Claude Code | 277 | Claude Code | 50 | 5,223 tok |
| JuliaFEM/JuliaFEM.jl juliafem.github.io The JuliaFEM software library is a framework that allows for the distributed processing of | 275 | Codex, OpenCode | 1 | 4,258 tok |
| NVIDIA/cosmos-curator Cosmos Curator is a powerful video curation system that processes, analyzes, and organizes | 264 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 1,442 tok |
| yazinsai/tilawa tilawa.dev Offline Quran verse recognition — identify surah and ayah from audio. (Formerly offline-ta | 263 | Codex, OpenCode | 1 | 1,281 tok |
| helixnow/deep-student deepstudent.cn An open-source, local-first AI learning workbench | 261 | Claude Code, Codex | 2 | — |
| yunshenwuchuxun/latex-paper-skills A modular skill-based framework for writing, revising, and managing LaTeX academic papers | 256 | Codex | 8 | — |
| handsomeZR-netizen/mathmodel-skill A mathematical modeling skill for three competitions (CUMCM/MCM/Electrician Cup)—harness-a | 252 | Codex, OpenCode | 1 | 604 tok |
| xucao-42/bilateral_normal_integration Official implementation of "Bilateral Normal Integration" (BiNI), ECCV 2022. | 245 | Claude Code, Codex, OpenCode | 2 | 1,838 tok |
| romovpa/claudini arxiv.org Autoresearch for LLM adversarial attacks | 241 | Claude Code | 2 | 1,257 tok |
| ProjectDXAI/labrat dxrg.ai Autonomous multi-branch research lab. Branches compete for compute budget. The system conv | 239 | Claude Code, Codex, OpenCode | 3 | 1,280 tok |
| maxwell2732/codex-stata-for-economists A Codex Stata pipeline for Economists by 朱晨 | Genetic Social Science Research. | 238 | Claude Code, Codex, OpenCode | 33 | 5,263 tok |
| isbeorn/nina nighttime-imaging.eu N.I.N.A. (Nighttime Imaging 'N' Astronomy) - Advanced astrophotography sequencing software | 232 | Claude Code, Codex, OpenCode | 3 | 2,705 tok |
| microsoft/P.808 This is an open-source implementation of the ITU P.808 standard for "Subjective evaluation | 230 | Claude Code, Codex, GitHub Copilot, OpenCode | 6 | 1,712 tok |
| RealSeaberry/AutoMCM-Pro Full-stack automated mathematical modeling competition Skill, supporting Claude Code / Cod | 221 | Claude Code, Codex | 4 | — |
| svd-ai-lab/sim-cli Turn existing CAE files into structured text an agent can use — COMSOL, Abaqus, Fluent, HF | 214 | Claude Code | 1 | 4,423 tok |
| CamusGIT/EvoQuant EvoQuant is a self-evolving AI research agent specialized in quantitative investment resea | 212 | Codex, OpenCode | 1 | 572 tok |
| ab604/claude-code-r-skills Claude Code configurations for R development. | 198 | Claude Code | 9 | — |
| SkBlaz/py3plex skblaz.github.io Py3plex - A multilayer complex network visualization and analysis library in python3 | 189 | GitHub Copilot | 1 | 2,573 tok |
| VerisimilitudeX/DNAnalyzer Precision genomics for everyone, everywhere. Powered by private AI. | 186 | Codex, OpenCode | 1 | 1,306 tok |
| dualverse-ai/station dualverse.ai The Station is an open-world multi-agent environment where AI agents pursue autonomous sci | 185 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 7,604 tok |
| ArcInstitute/SRAgent LLM agents for working with the SRA and associated bioinformatics databases. | 181 | Codex, Gemini CLI, OpenCode | 2 | 631 tok |
| yusong652/itasca-mcp pypi.org MCP server connecting AI agents to ITASCA engines (PFC, FLAC, 3DEC, MPoint, MassFlow) — ru | 173 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 4,770 tok |
| Learning-Bayesian-Statistics/baygent-skills A set of skills to call your agent Bayes. Thomas Bayes. | 172 | Claude Code | 1 | 1,343 tok |
| sweetcornna/mathodology Math modeling Agent Skills designed for mathematical modeling competitions: MCM/ICM, CUMCM | 172 | Codex, OpenCode | 1 | 884 tok |
| pachterlab/paperpush | 163 | Claude Code, Codex, OpenCode | 3 | 2,328 tok |
| learningmatter-mit/AtomisticSkills arxiv.org Intergrating Atomistic Skills into Agentic IDEs (Cursor, Claude Code, Google Antigravity, | 161 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 1,946 tok |
| NVIDIA/nvalchemi-toolkit nvidia.github.io ALCHEMI Toolkit is a developer toolkit for accelerating training and inference for AI in c | 159 | Claude Code, Codex, OpenCode | 2 | 2,751 tok |
| notlate-cn/code-reader-skills 🧠 Cognitive science-based Claude Skills for deep code understanding | Tools for deep sour | 153 | Claude Code | 1 | 1,118 tok |
| equinor/neqsim equinor.github.io NeqSim is a library for calculation of fluid behavior, phase equilibrium and process simul | 150 | Claude Code, Codex, GitHub Copilot, Cursor, OpenCode, Windsurf | 6 | 34,717 tok |
| jaccen/Awesome-Gaussian-Skills jaccen.github.io Continuously updated papers on computer graphics, 3DGS, and spatial intelligence; AI Agent | 149 | Claude Code | 1 | 4,890 tok |
| cyanheads/pubmed-mcp-server npmjs.com Search PubMed/Europe PMC, fetch articles and full text (PMC/EPMC/Unpaywall), citations, Me | 146 | Claude Code, Codex, OpenCode | 2 | 12,582 tok |
| tobiasosborne/alethfeld Rigorous Proofs via Adversarial AI Agents | 144 | Claude Code, Codex, OpenCode | 13 | 444 tok |
| softnanolab/bagel Protein Engineering via Exploration of an Energy Landscape | 143 | Claude Code | 2 | — |
| HarleyCoops/KimiK3Manim Create epic math and physics explainer animations with Kimi K3. | 142 | Claude Code | 1 | 2,144 tok |
| goodfire-ai/param-decomp Parameter Decomposition | 142 | Claude Code | 1 | 504 tok |
| joshzyj/open-scholar-skill Open scholar skill, a claude code plugin, for academic research | 140 | Claude Code | 57 | 3,613 tok |
| Netflix-Skunkworks/oci-agent | 137 | Claude Code | 1 | 143 tok |