9 tagged cell communication, measured the same way as everything else here.
Browse within: Single-Cell 9bioinformatics 9deconvolution 9machine-learning 9python 9
Skill Claude CodeCodex
Determine cell type composition at each spatial location through deconvolution or annotation. Use when user wants to know what cell types exist, their proportions, or where specific cells are located. Triggers: "cell type composition", "deconvolution", "what cells are here", "cell type proportions", "estimate cell…
Skill Claude CodeCodex
Find differentially expressed genes between conditions, regions, or cell types. Use when user wants to compare gene expression, find markers, or identify condition-specific changes. Triggers: "differential expression", "DEG", "marker genes", "compare conditions", "what genes differ", "find markers", "condition…
Skill Claude CodeCodex
Understand the biological meaning of gene sets through pathway and functional enrichment analysis. Use when user has gene lists (DEGs, markers, SVGs) and wants to know what pathways or functions they represent. Triggers: "pathway analysis", "enrichment", "GSEA", "GO terms", "what pathways", "biological function"…