12,531 tagged Scientific, measured the same way as everything else here.
Browse within: bioinformatics 258ai-scientist 209LLM 185agents 185biology 166reasoning-language-models 165ai-scientists 164reasoning-agent 164tool-use 164agent 158data-analysis 129cancer-genomics 128computational-biology 128literature-review 120
khshanovskyi/custom-agent-skills
Skill Claude Code
Converts values between units of measurement across categories: length (km, miles, feet, inches), weight (kg, lbs, oz, stone), temperature (Celsius, Fahrenheit, Kelvin), volume (liters, gallons, cups, ml), area (m², acres, ft²), speed (km/h, mph, knots), time (seconds to years), data storage (bytes to petabytes)…
svd-ai-lab/sim-plugin-workbench
Skill Claude CodeCodex
Use when the user asks Codex, Claude Code, ChatGPT-style coding agents, or another AI agent to connect to Ansys Workbench through sim-cli. Supports Workbench journal execution, project inspection, persistent sessions, Mechanical handoff, bounded execution, artifact reporting, and troubleshooting. Requires a user-owned…
aws-samples/sample-healthomics-agentic-setup
Skill Claude Code ✓ vendor
AWS HealthOmics workflow development, migration, running, and debugging using the HealthOmics MCP server.
crcresearch/llm-wiki-memory-template
Skill Claude Code
File experiment results to the wiki following the SCHEMA Ingest procedure. Use after an experiment run produces metrics, ablations, or comparisons worth keeping as durable project memory.
Kernel-Science/physlibsearch-skill
Skill Claude CodeCodex
Semantic search over Physlib, a formal Lean 4 library of physics theorems and definitions. Use when asked to find Lean 4 declarations related to physics or mathematics, look up formal proofs, retrieve theorem signatures, or browse the Physlib module hierarchy.
Skill Claude CodeCodex
Mathematical computations and word problems, statistical analysis, data visualization, charting, and quantitative data processing tasks. Use when the user requests mathematical calculations, statistical analysis, data visualization, charting, or quantitative data processing.
Skill Claude CodeCodex
AI collaborator for RSpace, an open-source research data management platform. Use when the user asks to create or edit RSpace documents, manage samples and inventory, search records, or coordinate work across research tools connected to RSpace. Works through the RSpace MCP server.
Skill Claude CodeCodex
Use whenever working with QGIS, GIS layers, spatial analysis, geoprocessing, map rendering, CRS conversion, vector/raster operations, or PyQGIS code. Always apply this before calling QGIS MCP tools or writing spatial queries.
Suzhou-Tongyuan/sysbuilder-mcp-server
Skill Codex
Use when creating, refining, reviewing, or validating SysML models in this workspace, especially when the task involves Sysbuilder, requirements, behavior, structure, interfaces, parameters, traceability, naming, diagram selection, or model quality checks.
Skill Claude CodeCodex
Search, browse, and analyze CERN GitLab repositories for HEP code, documentation, and examples. Use this skill whenever the user mentions CERN GitLab, LHCb/ATLAS/CMS code, HEP software stacks, or wants to find code patterns, inspect build systems, read READMEs, search issues, or explore releases in gitlab.cern.ch…
yushiran/Academic-Figure-Figma-CC-Skills
Skill Claude CodeCodex
Use when the user wants a paper figure (framework, pipeline, architecture, method overview) drawn, rebuilt, or refined as an editable vector in Figma via Claude Code — including reproducing a candidate/reference image (e.g. studio-pro C01-C04) at exact print size. Also use when the user needs to set up or fix the…
Hongda-Zhao/bio-gene-to-reference-tree
Skill Claude CodeCodex
Orchestrate this repository's end-to-end auditable protein or nucleotide gene-tree workflow. Use when a request spans several stages or the active stage is unclear; select one task adapter, then follow the canonical Skill and its review gates.
Skill Claude CodeCodex
Creates publication-quality scientific figures for academic papers. Backend is chosen by host paper extension — .tex papers get TikZ figures, .typ papers get CeTZ figures; the two are never mixed. Use when creating block diagrams, system architectures, flowcharts, or technical illustrations for papers and theses.…
MarieLynneBlock/arcanum-artifex
Skill Claude Code
Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, colour schemes, multi-column formats, figure integration, and poster-specific best practices for visual communication.
Skill Claude CodeCodex
Drive the CBCTScope CBCT viewer through its MCP server for a human reader. Use when a user asks to open, navigate, window, bookmark, or snapshot a CBCT or dental radiograph in CBCTScope, or to run a reading choreography (MPR survey, pano survey, TMJ setup, replay saved views). Navigation only, never interpretation.
Skill Claude CodeCodex
Use when about to state a number, claim two programs are equivalent, claim a speedup, or state a complexity — codecalc computes these exactly instead of estimating them, and this file says when calling is mandatory and how results must be reported.
Skill Claude CodeCodex
Generate 2D structure images and interactive 3D viewers from chemical names or SMILES. Supports PNG/SVG output for 2D and 3Dmol.js HTML viewers for 3D conformers.
SkillMedev/academic-researcher
Skill Claude CodeCodex
Runs a PRISMA-compliant systematic review from PICO question and pre-registered protocol through search strings, two-stage screening, risk-of-bias appraisal, and GRADE-rated synthesis. Use when someone asks "run a systematic review", "build my search strategy and inclusion criteria", "screen these studies against a…
lyzbcy/experiment-report-skill
Skill Claude CodeCodex
A workflow for turning an experiment into a structured report with an interactive frontend, visualisations, screenshots, and a document-ready report.
javidmardanov/paper-banana-skill
Skill Claude CodeCodex
Generates publication-ready academic illustrations using the PaperBanana five-agent pipeline (arXiv:2601.23265). Diagram mode runs 5 VLM/image-model agents (Gemini by default; OpenAI, Anthropic, OpenRouter supported) with multimodal in-context learning from curated reference images, venue style packs, and an…
inna-gazieva/academic-review-skill
Skill Claude CodeCodex
A review process for evaluating a scientific article for publication. It applies when an uploaded PDF or DOCX article needs a peer review or publication assessment.
Skill Claude Code
Uma ferramenta para consultar e padronizar abreviações de nomes de revistas e periódicos científicos, incluindo os formatos ISO 4 e MEDLINE. Também trabalha com nomes de periódicos em arquivos BibTeX, usados para referências bibliográficas.
Skill Claude CodeCodex needs its repo
Conventions and tooling for ASU's Sol supercomputer, built around the solx CLI. Use whenever a task is happening on Sol - the user mentions Sol or ASU Research Computing, or is clearly on their Sol account (a Sol /scratch path, an sbatch/interactive job, a login/compute node). It covers renewing /scratch files Sol has…
Agents365-ai/target-prioritization
Skill Claude CodeCodex
Prioritize drug targets from a ranked gene list (e.g., scRNA-seq DE output) by orchestrating parallel API queries against UniProt, OpenTargets (with integrated DepMap CRISPR essentiality + gnomAD constraint), PubMed, the Human Protein Atlas (HPA), and ChEMBL tool compounds, then re-ranking by a composite score…
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: