Scientific skills

12,549 tagged Scientific, measured the same way as everything else here.

Browse within: bioinformatics 265ai-scientist 209LLM 185agents 185biology 173reasoning-language-models 165ai-scientists 164reasoning-agent 164tool-use 164agent 158data-analysis 136cancer-genomics 135computational-biology 135literature-review 120

calculate-smi

793

leandroavl/SMI_mcp

Skill Claude CodeCodex

Use this skill to compute a monthly, non-parametric, KDE-based Soil Moisture Index (SMI) from a monthly soil moisture CSV time series (as produced by the era5-mcp extractpointtimeseries tool). Trigger when the user asks to "compute SMI", "calculate soil moisture index", or needs a standardized drought/wetness index…

not rated 0 1mo ago A 83 tokens

paperframe-ppt

794

MyLiya46/paperfream

Skill Claude CodeCodex

A tool for turning a research paper or method description into a PowerPoint framework diagram that remains editable. It also covers model architecture diagrams, technical roadmaps, and method flowcharts.

not rated 0 1mo ago A 90 tokens

anluin/colab-mcp

Skill Codex

Operate Google Colab through colab-mcp for short commands, durable jobs, GPU/CPU allocation, recovery, artifact publication, and cleanup. Use whenever an agent runs work on a Colab runtime or must choose between synchronous and durable execution.

not rated 0 29d ago A 55 tokens

yrb-hes-evidence-mcp

796

TIGERwu0118/yrb_hes_mcp

Skill Codex

Read-only retrieval and source-grounded synthesis of Yellow River Basin human–earth systems evidence through the YRB-HES Evidence MCP. Use when a task asks for cross-paper evidence, SAG entities/events, structured spatial or temporal evidence, subchunk context, document provenance, or comparison rows from the YRB3…

not rated 0 16d ago A 74 tokens original MIT

bim-agent

797

Daviidro/bim-agent

Skill Claude CodeCodex

BIM Agent — Query and validate Building Information Models (IFC) through natural language.

not rated 0 1mo ago A 21 tokens original MIT

computase

798

madhusudan-kulkarni/computase

Skill Claude CodeCodex

Performs verified local nucleotide-sequence computation with Computase. Use when an agent needs sequence composition or GC bounds, a reverse complement, translation, candidate ORFs, or IUPAC motif sites through Computase MCP tools or the isolated Skill runner.

not rated 0 21d ago A 53 tokens original MIT

ASVLCII/verified-technical-solver

Skill Codex

Solve and verify mathematical, logical, engineering, and dimensional CAD problems with deterministic tools and explicit evidence. Use for arithmetic, algebra, calculus, equation systems, quantitative claims, difficult multi-step questions, reasoning audits, unit-sensitive engineering work, parametric 3D parts…

not rated 0 27d ago A 84 tokens original MIT

ymo6/illustrator-figure-mcp

Skill Claude CodeCodex

Review an Adobe Illustrator scientific figure and issue findings without hiding defects by flattening or tracing. Use for reference-fidelity checks, layout and alignment review, connector routing review, text-fit checks, raster-atomicity and editability inspection, region gates, or repeated verification inside a…

not rated 0 16d ago A 72 tokens original MIT

evolving-hypotheses

801

Ahmad-Jaradat-Space/co-scientist-plugin

Skill Claude CodeCodex

Improves an existing scientific hypothesis by combining it with another, simplifying it, making it feasible, or reimagining it out of the box, and records the result as a new hypothesis with its parents in the co-scientist database. Use when the user asks to improve, fix, merge, simplify, repair or rethink a…

not rated 0 23d ago A 99 tokens original Apache-2.0

hongzhizuo/johgee-open-irrigation

Skill Claude CodeCodex

Calculate a UK home-garden watering plan from self-reported rain and soil feel using the Johgee irrigation core. Use when a gardener asks how much to water a UK lawn, border, container, vegetable bed or new planting, or when you need millimetres, litres or runtime from Johgee. Do not use for hosepipe-ban confirmation…

not rated 0 19d ago A 100 tokens original MIT

openfoam-cfd-copilot

803

kimlnw/openfoam-mcp

Skill Claude CodeCodex

Set up, mesh, run, and debug OpenFOAM CFD simulations. Use whenever the user is working with OpenFOAM or CFD — sizing a near-wall mesh (y+, first-cell height, wall grading), choosing a solver or turbulence model, writing or editing case dictionaries (controlDict, fvSchemes, fvSolution, blockMeshDict, 0/ fields)…

not rated 0 12d ago A 135 tokens original MIT

eln-form-design

804

shjk0817/eln-mcp

Skill Claude CodeCodex

A workflow for creating and editing electronic laboratory notebook (ELN) form templates. ELNs are digital records used to document laboratory work and test results.

not rated 0 17d ago A 88 tokens

naturepedia

805

RobbieRazor/robbies-razor-benchmarks

Skill Claude CodeCodex

Use this skill whenever a user or autonomous agent needs scientifically grounded, machine-readable knowledge about natural systems, ecological relationships, geometry in nature, established mathematical references including Hopf Fibration, topology, fiber bundles, state-space geometry, weather, water systems, ocean…

not rated 0 2d ago A 100 tokens

psychosynth

806

3esign/psychosynth

Skill Claude CodeCodex

Synthetic behavioral data for agent simulations — not token analytics. Big Five / Dark Triad / prospect-theory personality profiles, profile-conditioned responses to high-stakes trading and negotiation scenarios, and a cognitive-bias reference taxonomy. Free deterministic previews; paid queries settle per-call in USDC…

not rated 0 1mo ago A 162 tokens

mathgraphs

807

architectds/mathgraphs-mcp

Skill Claude CodeCodex

Math graphing, 3D scene building with lights and particles, and presentations.

not rated 0 23d ago A 19 tokens original MIT

wellness-air

808

davidmosiah/wellness-air

Skill Claude CodeCodex

Local-first air quality MCP for agents. Prefer MCP tools if connected; otherwise the package CLI. Use when the user wants Wellness Air data or actions through an agent.

not rated 0 14d ago A 37 tokens copy · 88% MIT

helena-bioinformatics/folklore-mcp

Skill Claude Code

Use Folklore Clinical Variant Interpretation MCP for public clinical variant evidence, variant-linked literature, publication details, ClinGen gene-disease assertions, or semantic biomedical Literature Corpus search from Biorouter.

not rated 0 changed today A 53 tokens original Apache-2.0

helena-bioinformatics/noodle-mcp

Skill Codex

Find, inspect, compare, and traverse public biomedical research literature. Use for PubMed or scholarly paper search, publication details, PMID/DOI/PMCID lookup, related papers, citation paths, semantic literature neighborhoods, corpus coverage, or questions asking what research exists about a gene, variant…

not rated 0 12d ago A 105 tokens original Apache-2.0

ogc-geoinquire

811

lukwe/mcp_or_skill_for_geoenquire_ogc

Skill Claude CodeCodex

Use when a user wants an LLM or agent to inspect, prepare, validate, or execute Geo-INQUIRE OGC API Processes at voice.pi.ingv.it/geoinquire, including SOLWCAD, CONDUIT, and PYBOX. The skill enforces preflight review, missing-parameter questions, explicit user confirmation before execution, async job polling, and…

not rated 0 2mo ago A 86 tokens

gjq-quantum-runtime

812

guoji-quantum/gjq-runtime-mcp-server

Skill Claude CodeCodex

Run quantum circuits on the GuoJi / CETC-ICQ Quantum Cloud Platform through the gjq-runtime MCP server. Use when the user wants to list quantum backends, submit sampling or expectation-estimation jobs, transpile circuits, or poll quantum task status and results via the gjq MCP tools.

not rated 0 29d ago A 69 tokens

jsonstat

813

idescat/mcp

Skill Claude CodeCodex

Read and interpret JSON-stat 2.0 datasets correctly. Use when working with JSON-stat responses from statistical APIs (Idescat, Eurostat, national statistical offices) to locate a cell value in the flat row-major value array from its category combination, using the dimension index and stride/offset arithmetic, and to…

not rated 0 3d ago A 75 tokens original MIT

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: