Interpret and apply BY custom scoring metrics for protein and antibody design. This skill covers ipSAE (interface Predicted Structural Accuracy Error) — the primary custom metric that differentiates BY from generic structure prediction tools — along with ipTM, pLDDT, RMSD, liability scoring, and the BY composite…
Implement an existing feature spec end-to-end — pick an unprocessed feature spec (one whose ## Phase N — ... heading in specs/roadmap.md does not yet carry the ✅ lifecycle marker), cut a feature branch, walk plan.md task groups in order with one primary atomic Conventional-Commits commit per group (plus optional small…
Scaffold a feature spec for a roadmap phase and open it as a PR for human review. Reads specs/roadmap.md, lets the user pick a phase (or accepts one as argument), runs preflight checks, cuts a feature branch, writes specs/YYYY-MM-DD- / (requirements.md, plan.md, validation.md — grounded in specs/mission.md and…
Improve OpenAPI documents for AI-readiness by fixing issues and enriching content based on Jentic API AI-Readiness Framework (JAIRF) scoring. Use when you need to raise an API's quality score, fix diagnostics, or add missing descriptions/summaries/examples — whether directly requested ('improve my API', 'fix OpenAPI…
Design and validate LLM-as-judge scoring — pairwise vs pointwise, bias correction, anchor calibration, and the cases where a judge is the wrong tool. Use when the user is building an eval, scoring open-ended outputs, or comparing model versions and mentions LLM-as-judge, model grader, pairwise comparison, position…