sequence design skills

29 tagged sequence design, measured the same way as everything else here.

Browse within: design-tools 28bioinformatics 12inverse-folding 12binder 11structure-design 10awesome 7openclaw 7protein-design 7Biomedical 6awesome-list 6genomics 6protein-engineering 6all-atom 5diffusion 5

PharMolix/OpenBioMed

Skill Claude CodeCodex

All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For structure…

1.1k 1mo ago A 89 tokens original MIT

boltzgen

02

adaptyvbio/protein-design-skills

Skill Claude CodeCodex

All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For backbone-only…

157 2mo ago A 103 tokens original MIT

protein-design

03

BioTender-max/ProteinClaw

Skill Claude CodeCodex

Computational protein design toolkit. Use this skill group when: (1) Designing protein binders from scratch, (2) Predicting protein structures (Chai, Boltz, Protenix), (3) Sequence design with ProteinMPNN/LigandMPNN/SolubleMPNN, (4) Quality control and filtering of protein designs, (5) Planning and managing binder…

11 6mo ago A 145 tokens

boltzgen

04

BioTender-max/ProteinClaw

Skill Claude CodeCodex

All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For sequence-only…

11 6mo ago A 92 tokens

iggm

05

BioTender-max/ProteinClaw

Skill Claude CodeCodex

Antibody and nanobody CDR design using IgGM (generative model by TencentAI4S). Use this skill when: (1) Designing nanobody (VHH) CDR loops against a target, (2) Designing full antibody (heavy + light chain) CDRs, (3) Redesigning existing antibody CDRs, (4) Need antigen-conditioned antibody generation, (5) Generating…

11 6mo ago A 127 tokens