binder skills

16 tagged binder, measured the same way as everything else here.

Browse within: design-tools 15structure-design 12sequence-design 11diffusion 8protein-design 7bioinformatics 6protein-engineering 6all-atom 5

PharMolix/OpenBioMed

Skill Claude CodeCodex

All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For structure…

1.1k 1mo ago A 89 tokens original MIT

boltzgen

02

adaptyvbio/protein-design-skills

Skill Claude CodeCodex

All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For backbone-only…

157 2mo ago A 103 tokens original MIT

rfdiffusion

03

zongtingwei/Bioclaw_Skills_Hub

Skill Claude CodeCodex

Generate protein backbones using RFdiffusion, a diffusion-based generative model for de novo protein structure generation. Use this skill when: (1) Designing binder scaffolds for a target protein, (2) Generating novel protein backbones from scratch, (3) Scaffolding functional motifs into new proteins, (4) Specifying…

26 4mo ago A 130 tokens original MIT

protein-design

04

BioTender-max/ProteinClaw

Skill Claude CodeCodex

Computational protein design toolkit. Use this skill group when: (1) Designing protein binders from scratch, (2) Predicting protein structures (Chai, Boltz, Protenix), (3) Sequence design with ProteinMPNN/LigandMPNN/SolubleMPNN, (4) Quality control and filtering of protein designs, (5) Planning and managing binder…

11 6mo ago A 145 tokens

boltzgen

05

BioTender-max/ProteinClaw

Skill Claude CodeCodex

All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For sequence-only…

11 6mo ago A 92 tokens