Scientific

younes-io/agent-skills

Plugin Claude Code

Bundles 2 skills · 166 tokens together

TLA+ skills for checking specs and writing proofs.

JeanDiable/academic-research-plugin

Plugin Claude Code

Bundles 10 skills · 1,126 tokens together

Academic research toolkit for AI PhD researchers — literature survey, paper reviewing, citation management, and more.

tondevrel/scientific-agent-skills

Plugin Claude Code

Bundles 55 skills, 2 commands, 1 MCP server · 3,848 tokens together

Agent skills for scientific computing, research workflows, and data analysis.

huangzt/my-agent-skills

Skill Claude CodeCodex

A Python library for bioinformatics and community ecology, the study of biological communities such as groups of microbes or species. It works with DNA, RNA, and protein sequences, alignments, phylogenetic trees, and diversity measurements.

EconSolider/dynare-copilot

Plugin Claude Code

Bundles 1 skill · 238 tokens together

Turn macro intuition into validated Dynare .mod files — a coding agent skill for DSGE modeling.

onescience-ai/OneSkills

Plugin Claude Code

Bundles 20 skills · 2,311 tokens together

OneScience / OneSkills skills for AI-native scientific research workflows, coding, runtime submission, debugging, and environment setup.

K-Dense-AI/drug-discovery-agent-skills

Skill Claude Code

Analyze and engineer protein glycosylation. Scan sequences for canonical N-glycosylation sequons (N-X-S/T with X not proline, including overlapping sites), predict O-GalNAc hotspots, read glycan notation, and reach the curated external tooling (NetNGlyc, NetOGlyc, GlycoShield, GlycoWorkbench, GlyTouCan, GlyConnect).…

htlin222/cps-skills

Skill Claude Code

End-to-end clinical diagnostic reasoning skill. Takes a patient case (SCENARIO.md), runs multi-persona Bayesian reasoning rounds with textbook evidence and literature search, outputs structured DDx with likelihood ratios. Use when solving clinical cases, generating differential diagnoses, discussing clinical…

Lambenthan/paper-discipline-skills

Skill Claude CodeCodex

Instructions for checking that a research paper's main claims, assumptions, methods, and conclusions remain logically consistent after edits.

nickzren/opentargets-mcp

MCP server Claude CodeCodexCursor +2

MCP server for Open Targets Platform biomedical data access. Runs locally from the opentargets-mcp Python package.

qosi-org/arxivist

Skill Claude CodeCodex

ArXivist is a multi-agent orchestration skill that converts scientific papers (arXiv PDFs or URLs) into fully executable, reproducible Git repositories through a structured pipeline. Use this skill whenever a user mentions: converting a paper to code, reproducing a research paper, implementing an arXiv paper, turning…

QiZishi/OphAgent

Skill Claude CodeCodex

An ophthalmology interview helper that turns a patient's main eye-related complaint into structured clinical information and suggests the fewest necessary follow-up questions. Ophthalmology is the medical specialty focused on the eyes.

CharlesHahn/DuIvySkills

Skill Claude CodeCodex

A workflow guide for analysing protein molecular-dynamics simulations, which model how atoms move over time. It describes procedures for correcting periodic-boundary artefacts, measuring motion and flexibility, and studying structural changes and interactions.

Delphine-L/claude_global

Skill Claude Code

Best practices for data aggregation, recalculation, and category management in scientific analyses. Covers when to recalculate vs reuse aggregated data, handling category changes, and ensuring analytical accuracy.

aloth/overleaf-skill

Skill Claude CodeCodex

Sync and manage Overleaf LaTeX projects from the command line. Pull projects locally, push changes back, compile PDFs, and download compile outputs like .bbl files for arXiv submissions. Use when working with LaTeX, Overleaf, academic papers, or arXiv.

SkyShannonProver/shannon-prover

MCP server Claude CodeCodexCursor +2

MCP server "shannon-prover" as configured in SkyShannonProver/shannon-prover. Runs locally from the shannon-prover Python package.

mantou6666/Math-Modeling-Agent-Flow

Skill Codex

A finalization guide for mathematical-modeling projects after the main results are largely fixed.

GGbond-bo/MemOmics-Agent

Skill Claude Code

Multi-perspective academic paper review with dynamic reviewer personas. Simulates 5 independent reviewers (Journal-Fit Reviewer + 3 peer reviewers + Devil's Advocate) with field-specific expertise. Supports full review, re-review (verification), quick assessment, methodology focus, Socratic guided, and calibration…

unitarylab/quantum-practices

Skill Claude CodeCodex

Use when users ask about solving the discrete logarithm problem g^x ≡ y (mod P) with Shor-style two-register Fourier sampling, building/explaining DLP circuits, running simulator demos, or debugging post-processing (continued fractions plus two-dimensional Fourier-sample congruence solving). Triggers: discrete log…

Asem-D/arcgis-portal-mcp

Skill Claude CodeCodex

MCP server for ArcGIS Portal and ArcGIS Online. 66 tools for search, inspect, publish, query, manage, audit, and administer ArcGIS content. Use when: the user wants to work with feature services, web maps, layers, groups, users, webhooks, or portal administration through an AI assistant.

Arielbs/rosetta-mcp-server

MCP server Claude CodeCodexCursor +2

Rosetta/PyRosetta protein modeling and Biotite translation for computational biology. Runs locally from the rosetta-mcp-server npm package. Needs 3 environment variables to run.

huifer/drug-discovery-skills

Plugin Claude Code

Bundles 17 skills · 916 tokens together

Pharmaceutical R&D intelligence skills for target analysis, competitive landscape, clinical trials, and market research.

ZZZzzzSleep/xuzilong-skills

Skill Codex

Use when working in Xu Zilong academic projects with Data/Program/Results/Manuscripts/Submissions and needing stable interfaces between generated results, hand-edited manuscript inserts, and submission artifacts.

wspringer/highs-mcp

MCP server Claude CodeCodexCursor +2

A Model Context Protocol (MCP) server that provides linear programming (LP) and mixed-integer programming (MIP) optimization capabilities using the HiGHS solver. Runs locally from the highs-mcp npm package.