12,365 tagged Scientific, measured the same way as everything else here.
Browse within: bioinformatics 260ai-scientist 207LLM 186agents 186biology 170reasoning-language-models 165ai-scientists 164reasoning-agent 164tool-use 164agent 159data-analysis 133cancer-genomics 132computational-biology 132literature-review 120
Skill Claude CodeCodex
A workflow guide for analysing protein molecular-dynamics simulations, which model how atoms move over time. It describes procedures for correcting periodic-boundary artefacts, measuring motion and flexibility, and studying structural changes and interactions.
Skill Claude Code
Core bioinformatics concepts including SAM/BAM format, AGP genome assembly format, sequencing technologies (Hi-C, HiFi, Illumina), quality metrics, and common data processing patterns. Essential for debugging alignment, filtering, pairing issues, and AGP coordinate validation.
Skill Claude CodeCodex
Sync and manage Overleaf LaTeX projects from the command line. Pull projects locally, push changes back, compile PDFs, and download compile outputs like .bbl files for arXiv submissions. Use when working with LaTeX, Overleaf, academic papers, or arXiv.
Skill Claude CodeCodex
MCP server for ArcGIS Portal and ArcGIS Online. 70 tools for search, inspect, publish, query, manage, audit, and administer ArcGIS content. Use when: the user wants to work with feature services, web maps, layers, groups, users, webhooks, or portal administration through an AI assistant.
Skill Claude Code
A workflow entry point for the Chinese national mathematical modelling competition. It coordinates problem analysis, modelling, programming, diagrams, paper writing, and verification.
Skill Claude Code
Multi-perspective academic paper review with dynamic reviewer personas. Simulates 5 independent reviewers (Journal-Fit Reviewer + 3 peer reviewers + Devil's Advocate) with field-specific expertise. Supports full review, re-review (verification), quick assessment, methodology focus, Socratic guided, and calibration…
Skill Claude CodeCodex
Explains and demonstrates UnitaryLab's small-scale adiabatic quantum linear-system solver. Use it for AQC or QLSP questions, simulator examples, and work involving Householder state preparation, SVD block encoding, adiabatic schedules, post-selection, solution rescaling, or residual checks.
Skill Codex
Use when working in Xu Zilong academic projects with Data/Program/Results/Manuscripts/Submissions and needing stable interfaces between generated results, hand-edited manuscript inserts, and submission artifacts.
LengFeng00/research-gap-finder
Skill Claude CodeCodex
Analyze scientific literature to identify research gaps and generate testable hypotheses. Use when users upload research papers (PDF), ask to "find research gaps", "generate hypotheses", "analyze literature", or "evaluate field progress". Automatically triggers for scientific paper analysis, literature review…
Skill Codex
Reconstruct or repair user-provided scientific and academic schematics as visually faithful, native editable PowerPoint (.pptx) files with executable build source; also inspect existing PPTX files for meaningful fidelity and editability defects. Use for…
BESSER-PEARL/research-agent-skills
Skill Claude CodeCodex
Review and analyze academic research papers. Use this skill when the user asks to review a paper, analyze a publication, summarize research, critique methodology, extract key findings, compare papers, check for numerical inconsistencies, or assess novelty and contributions of academic work. Also triggers when the user…
InternetMaximalism/lean-reinforced-concrete
Skill Claude CodeCodex
A follow-on skill for deeper security auditing once a system has been formalized in Lean (e.g. by lean-formal-audit and the audit/ folder exists). It turns the existing Lean formalization into an offensive tool: running Lean code (#eval / decide / #print axioms), using reasoning to form attack hypotheses, doubting and…
Skill Codex
Use when a task requires inspecting Honeybee geometry, hierarchy, Energy attributes, Radiance attributes, or HBJSON-native Energy/Radiance resources through the unified query bus.
Skill Codex
Create production-quality Manim Community Edition explainer videos, math animations, algorithm visualizations, paper/PDF explainers, data stories, and architecture diagrams. Use when a user asks for 3Blue1Brown-style programmatic animation, Manim scene planning/coding/rendering, Docker-based Manim setup, or…
Skill Claude CodeCodex
Generate ArcPy scripts for ArcGIS Pro using live map context, layer sampling, and ArcGIS‑aware prompt rules.
Skill Claude CodeCodex
Use when installing Anthropic's Claude Science on a geo-blocked machine (e.g. China) or running it without a Claude account. Downloads the binary from the unblocked downloads.claude.ai CDN, sets up the claude-science-api-bridge local proxy to route requests to ANY OpenAI- or Anthropic-compatible API (Volcengine…
xlbaoxl/interactive-map-builder
Skill Claude CodeCodex
Turn existing spatial or coordinate data into portable, browser-openable interactive map files and report-ready figures. Use when the user wants parcels, buildings, facilities, parking, roads, water, green space, projects, or Excel/CSV coordinates presented as a searchable, filterable, sortable map, map-and-list page…
Skill Claude CodeCodex
Write optimized Triton GPU kernels for deep learning operations. Covers the full spectrum from basic vector ops to Flash Attention, persistent matmul, fused normalization, quantized GEMM, and memory-efficient patterns.
chengziyue1222/math-model-agent
Skill Codex
Generate rigorous, readable mathematical-modeling papers from problem analysis, models, results, figures, tables and verifiable sources. Use when Codex needs a competition paper or a grounded modeling report.
Jill0099/causal-inference-mixtape
Skill Claude CodeCodex
This skill should be used when the user asks to "implement a DiD regression", "run a staggered difference-in-differences", "set up an event study", "implement IV / 2SLS", "run a regression discontinuity design", "build synthetic control", "do propensity score matching", "test parallel trends", "run Honest DiD", "wild…
HolobiomicsLab/asb-skill-collections
Skill Claude CodeCodex
Use when when you have aligned ChIP-Seq reads (single-end BED or paired-end BEDPE format) and need to identify enriched genomic regions by comparing ChIP signal against control background, with the ability to customize fragment length estimation, local bias calculation, and peak score thresholds.
Skill Claude CodeCodex
Secure local-first MCP server for ArcGIS Pro / ArcPy geoprocessing. Exposes 100 declarative ArcPy tools to MCP-compatible clients such as Claude Desktop and Cursor through stdio JSON-RPC. Use when operating local ArcGIS Pro data, running ArcPy/geoprocessing, managing geodatabases, projecting vector/raster data…
Skill Claude CodeCodex
Use when answering biomedical research questions that need source-backed evidence from local MCP servers, including gene, disease, drug, variant, phenotype, study, or clinical-trial questions.
Skill Claude Code
Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for actual review writing, manuscript revision. For evaluating…
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: