12,457 tagged Scientific, measured the same way as everything else here.
Browse within: bioinformatics 258ai-scientist 209LLM 185agents 185biology 166reasoning-language-models 165ai-scientists 164reasoning-agent 164tool-use 164agent 158data-analysis 129cancer-genomics 128computational-biology 128literature-review 120
szddddddd/easyreading-academic-paper
Skill Codex
A Chinese-language guide for turning computer-vision and computer-graphics research papers into complete, easier-to-read academic HTML articles. It explains the original paper's sections, formulas, figures, tables, algorithms, experiments, limitations, and appendices.
Skill Claude CodeCodex
Use this server to acquire and analyze EEG from OpenBCI hardware through BrainFlow.
PancrePal-xiaoyibao/dayi-search-mcp
Skill Codex
A skill for searching and extracting structured information about medicines, diseases, doctors, and symptoms from the Dayi MCP Server. MCP is a standard way for an agent to call an external tool.
Skill Claude CodeCodex
This directory contains reusable pipeline templates for the runqcpipeline tool.
Skill Codex
Use when working with CONTAM projects through the local contam MCP server, including discovering CONTAM executables and API integrations, listing .prj/.sim/.wth/.ctm files, inspecting or diagnosing project references, cloning scenario folders, running baseline/intervention case matrices, using contamxpy for…
Skill Claude CodeCodex
Use when any Simulink, Simscape, Stateflow, .slx, or simulink-tools task begins.
Skill Claude CodeCodex
Survey and analyze research papers. Use when the user wants to look into a specific paper — fetches it, returns an instant card (purpose, references, code), and queues deeper analysis. Reuses the surveyHelper MCP tools.
Skill Claude CodeCodex
Use when the task is to replicate a SWMF run end-to-end: from a paper, a structured spec (CCMC), or a prior run directory. Drives spec normalization, build, run-dir assembly, PARAM.in generation, pre-launch validation gate, submission, monitoring, postprocessing, and validation.
Skill Claude CodeCodex
Diseño de registro y metodología de la Encuesta Permanente de Hogares (EPH) del INDEC. Lee automáticamente el archivo de diseño correcto y aplica orientación metodológica antes de generar scripts R o Python con microdatos EPH. Trigger: cuando el usuario pide un script R o Python para procesar microdatos de la EPH…
Nikeandocean/carbon-factor-matcher
Skill Claude CodeCodex
Intelligent emission factor matching for carbon accounting. Uses hybrid search (keyword + embedding) with quality-based ranking to find the best emission factors from ELCD, US LCI, USDA LCA Commons, and ecoinvent databases.
sinagilassi/PyThermoCalcDB-NASA-MCP
Skill Claude CodeCodex
Extract thermodynamic tables and correlations from references (CSV, PDF, images, or text) and convert them into the project's structured pyThermoDB YAML schema. Supports data tables, constants tables, matrix-parameter tables, and equation-based correlations (e.g., Cp, vapor pressure, density, enthalpy of…
Skill Claude CodeCodex
Use this skill whenever the user is doing ML experiment work in a projtool-managed repo — that is, requests involving training, runs, manifests, reports, mutagen sync, AutoDL instances, GPU provisioning, experiment branches, worktrees, image builds, research threads / lineage / the docs registry, or projtool tool…
Skill Claude CodeCodex
Use when the user asks to search, inspect, summarize, compare, cite, or reason over locally indexed paper PDFs in rag-paper via MCP tools or direct local Chroma/rag-paper access.
Skill Claude CodeCodex
Use the shelx-mcp MCP server to run SHELX structure solution and refinement, look up SHELXL instructions, validate .ins files, and analyze refinement results from a chat interface.
Skill Claude CodeCodex
Standard operating procedure for an auditable, headless HEC-RAS workflow via the hec-ras MCP server — how to plan, copy, edit boundaries, run, QA-gate, read results, compare, plot, audit, and safely stop. Use FIRST whenever an agent is handed a HEC-RAS project (.prj folder) or a results file (.p##.hdf) plus a…
Skill Claude CodeCodex
Use this skill when reviewing an ML experiment, benchmark, ablation, or training run.
Skill Claude CodeCodex
Use when a finished manuscript is about to be submitted and the question is what to fix first: a pre-submission check, a submission-readiness pass, "what will get me desk rejected", reporting-guideline gaps (STROBE, CONSORT, PRISMA, COREQ), a missing ethics or funding or competing-interests or data-availability…
Skill Codex
Use when working with astronomical Table Access Protocol (TAP), ADQL query submission, VOSI capabilities/availability/tables metadata, VOTable TAP results, UWS async jobs, TAP output formats, or CLI/library behavior that depends on official IVOA TAP-family protocol semantics.
zamushwani/biomedical-ai-skills
Skill Claude CodeCodex
Systematic review and meta-analysis for clinical and preclinical evidence. Covers protocol registration, search strategy, screening, PRISMA 2020 flow diagrams, risk of bias, pooling with fixed and random effects models, small-study effects, sensitivity diagnostics, network meta-analysis, and GRADE/CINeMA certainty…
xuedai-mayi/envi-classic-remote-sensing
Skill Codex
A writing guide for turning Chinese remote-sensing experiment materials into a formal Word or PDF lab report. It uses the report template, experiment instructions, draft, and original screenshots as sources.
Skill Claude CodeCodex
Search, fetch, read, and download arXiv papers efficiently via the arxiv-mcp server. Use whenever the user wants to find academic papers, look up an arXiv id, read a paper's full text or a section, gather a literature set on a topic, or download a PDF/source. Triggers include "find papers on...", "what's the latest…
Skill Claude CodeCodex
Turn a circuit drawing, photo, sketch, or verbal description into a live simulation in Falstad's CircuitJS1 and open it in the browser. Use when the user shares a schematic image, a hand-drawn circuit, a netlist, or asks to simulate/visualise/build a circuit. Triggers on "simulate this circuit", "open this in…
marysatasselshaped667/skills-collection-1
Skill Claude Code
Search, download, and summarize academic papers from arXiv. Use when user says "search arxiv", "download paper", "fetch arxiv", "arxiv search", "get paper pdf", or wants to find and save papers from arXiv to the local paper library.
Skill Claude CodeCodex
Operate the DTU HPC cluster (DCC, LSF) through the dtu-hpc MCP connector. Invoke BEFORE any cluster work — submitting or monitoring jobs, checking queues or quotas, planning GPU experiments, fetching logs or artifacts, or diagnosing failed runs on DTU HPC. Covers queue selection, job chaining past the 24h walltime…
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