Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
/plugin marketplace add mims-harvard/ToolUniversenpx agentmods add plugins/mims-harvard/tooluniverse/plugingit clone --depth 1 https://github.com/mims-harvard/ToolUniverseGrade A, and why
tooluniverse scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured yesterday.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
What it actually says
{
"name": "tooluniverse",
"description": "1000+ scientific research tools for biology, chemistry, medicine, and data science. Access PubMed, UniProt, PubChem, TCGA, NHANES, GWAS Catalog, and hundreds more databases through a unified MCP interface. Includes 120+ specialized research skills for genomics, drug discovery, clinical analysis, protein variant interpretation, and more.",
"version": "1.4.0",
"author": {
"name": "Shanghua Gao",
"url": "https://shgao.site"
},
"homepage": "https://aiscientist.tools",
"repository": "https://github.com/mims-harvard/ToolUniverse",
"license": "Apache-2.0",
"keywords": [
"science",
"biology",
"chemistry",
"medicine",
"genomics",
"bioinformatics",
"rna-seq",
"deseq2",
"phylogenetics",
"drug-discovery",
"clinical-trials",
"pubmed",
"uniprot",
"pubchem",
"tcga",
"research",
"mcp"
]
}
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- yesterday First seen · 32 lines scan A 6efd3802df40
tooluniverse is a plugin published in the GitHub repository mims-harvard/ToolUniverse (1,660 stars, last pushed 2d ago), licensed Apache-2.0. Its token cost is not measured: this kind of file is read by the harness, not the model. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
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