Scientific skills

12,549 tagged Scientific, measured the same way as everything else here.

Browse within: bioinformatics 258ai-scientist 209LLM 185agents 185biology 166reasoning-language-models 165ai-scientists 164reasoning-agent 164tool-use 164agent 158data-analysis 129cancer-genomics 128computational-biology 128literature-review 120

molcrafts

769

MolCrafts/molmcp

Skill Claude Code

Computational chemistry with MolCrafts: find the real package API before writing science code. Covers molecular structure, topology, force fields, trajectories, RDF/MSD and other analysis, packing/solvation, 3D visualization, cluster jobs, and experiment workspaces.

not rated 0 15d ago A 58 tokens original BSD-3-Clause

causality-protocol

770

OpenInterpretability/openinterp-mcp

Skill Claude CodeCodex

Run the four mandatory checks (random-feature baseline, control-token norm, structural-rigidity α-sweep, and the paper-11 structure-matched control + naming gate) and return a verdict in {causal, weak-causal, confounded-structural, epiphenomenal-softmax, epiphenomenal-template, inconclusive-unverified, undetermined}.

not rated 0 2mo ago A 83 tokens

zhouning/dts-mcp-server

Skill Claude CodeCodex

A command-line tool for publishing 3D digital-twin tiles with DTS Engine 6.1, software for preparing large geospatial and 3D datasets for viewing. It works with formats such as shapefiles, terrain rasters, building models, and point clouds.

not rated 0 25d ago A 75 tokens

skill

772

asachs01/nutrition-mcp

Skill Claude CodeCodex needs its repo

USDA FoodData Central integration for nutrition lookup, meal logging, and macro tracking.

not rated 0 7mo ago A 0 tokens original MIT

avizo

773

songyb1998/avizo-mcp

Skill Codex

Automate Thermo Scientific Amira-Avizo projects with the local Avizo MCP server. Use when Codex needs to inspect Avizo/Amira data folders, summarize .hx workflows, classify .am/.measure.am/TIFF/Header files, generate reproducible .hx or Avizo Python scripts, create .pyscro plus .rc script-object skeletons, launch…

not rated 0 3mo ago A 105 tokens

gkanogiannis/Gigwa-MCP

Skill Claude CodeCodex

Produce a population diversity and structure report for a Gigwa variant set. Use this when a user asks to summarise genetic diversity, describe population structure, or assess relatedness for a run identified by its variantSetDbId. Walks through dataset-wide MAF/He/Ho/PIC/Fis, principal component analysis (PCA)…

not rated 0 today A 204 tokens original Apache-2.0

blender-synthgen

775

scott-createplay/blender-mcp-synthgen

Skill Claude CodeCodex

Generate 3D synthetic data in Blender the procedural way — grounded Geometry/shader/compositor node knowledge, Houdini→Blender translation, and a build→verify loop. Use when authoring Geometry Nodes / materials / compositor graphs, translating Houdini setups, or building domain-randomized synthetic datasets in Blender.

not rated 0 25d ago A 69 tokens original MIT

cfd-endpoints

776

DaveFan-NCHC/MCP-Server-for-CFD

Skill Codex

Use the current cfd-server HTTP endpoints and artifact preview/download flow correctly. Trigger this skill when an agent needs to run CFD analysis.

not rated 0 3mo ago A 34 tokens

math-circuit-studio

777

Lxvi101/math-circuit-studio

Skill Claude CodeCodex

Create interactive 2D/3D math graphs, explanatory CircuitJS electrical diagrams, and short Manim animations. Use when a visual graph, circuit schematic, or animated math explanation would materially improve the answer.

not rated 0 29d ago A 48 tokens

calculate

778

tetracoralla/math-anchor

Skill Codex

Use Math Anchor for reliability-sensitive mathematics. MUST load and use it for fixed-width arithmetic, bit/IEEE-754 facts, and large exact combinatorial counts. Also use it for exact or high-precision work, explicit conventions, verification, calculus, linear algebra, finance, probability, statistics, uncertainty…

not rated 0 changed 8d ago A 83 tokens original Apache-2.0

spoke-knowledge-graph

779

BaranziniLab/SPOKEAgent

Skill Claude CodeCodex

Traverse the SPOKE biomedical knowledge graph to find relationships between diseases, genes, compounds, proteins, pathways, anatomy, side effects and other biological entities.

not rated 0 9d ago A 36 tokens original Apache-2.0

clinical-statistics

780

NancyAlejandraNardelli/secure-clinical-data-agent

Skill Claude CodeCodex

ÚNICA herramienta para consultar estadísticas, conteos y cruces de historias clínicas. Permite agrupar por múltiples dimensiones (edad, sexo, zona, servicio, especialidad, diagnósticos, obrasocial, año, mes) y filtrar por fechas, patologías activas y tipos de registro.

not rated 0 2mo ago A 66 tokens

scopus-researcher

781

JOSETRA44/scopus-mcp

Skill Claude CodeCodex

Expert academic researcher using the Scopus MCP. Finds papers, retrieves full abstracts, builds author profiles, analyzes citation impact, and constructs advanced Boolean queries across the Elsevier Scopus database. Activate when asked to search for academic papers, analyze research trends, find citations, profile…

not rated 0 2mo ago A 67 tokens original MIT

corpus-analysis

782

alesop95/legal-consultant

Skill Claude Code

Applica una o piu delle dieci modalita della Corpus Analysis Suite a un corpus di paper gia caricati nella conversazione corrente: Intake Protocol, Contradiction Finder, Citation Chain, Gap Scanner, Methodology Audit, Master Synthesis, Assumption Killer, Knowledge Map Builder, So What Test, e Canon Update per quando…

not rated 0 12d ago A 168 tokens

openalex-researcher

783

JOSETRA44/openalex-mcp

Skill Claude CodeCodex

Use the OpenAlex MCP to search 250M+ scholarly works, retrieve author profiles, analyze institutional output, explore journal sources, and aggregate citation trends — all from the world's largest free and open scholarly database.

not rated 0 1mo ago A 48 tokens original MIT

reasoning-engine-mcp

784

codibre/reasoning-engine-mcp

Skill Claude CodeCodex

Deep algorithmic and mathematical reasoning via MCP tool. Use for complex computational problems, algorithm design, data structure optimization, complexity analysis, competitive programming, mathematical proofs, or any deep technical reasoning task that requires multi-step logical deduction. The model outputs ONLY the…

not rated 0 2mo ago A 67 tokens

econ-r

785

emmanueltsallis/econ-r-mcp

Skill Claude CodeCodex

Use this skill whenever the user asks for empirical analysis, econometrics, statistics, causal inference, regression, DiD, IV, RD, panel models, forecasting, matching/weighting, model tables, statistical diagnostics, or R-based reproducible reports. This skill turns the agent into a careful applied econometrician…

not rated 0 2mo ago A 95 tokens original MIT

crf-annotation

786

Cathylixi/LLX-Agent-MCP-Implementation

Skill Claude CodeCodex

Map a blank CRF's questions/fields to SDTM Domains and Variables, and recommend annotation style/placement, for building an annotated CRF (aCRF). Use when the user wants to annotate a CRF, generate an aCRF, or map CRF fields to SDTM.

not rated 0 16d ago A 65 tokens

research-skill

787

K-Host/skill-composer-mcp

Skill Claude CodeCodex

An academic research skill for finding, analysing, and reviewing scholarly literature. Scholarly literature includes published research papers and related academic sources.

not rated 0 2mo ago A 22 tokens

mcp-stats-engine-zx

788

wzx11223344/mcp-stats-engine

Skill Claude CodeCodex

A collection of 30 tools for statistical analysis, including tests, regression models, and time-series methods. It is intended for examining data and checking whether observed patterns are meaningful.

not rated 0 1mo ago A 7 tokens original MIT

gongchen0916/claude-science-codex-review

Skill Claude CodeCodex

Use when Claude Science must obtain an independent OpenAI Codex review, second opinion, reproducibility check, statistical or figure audit, debugging handoff, or delegated implementation.

not rated 0 2mo ago A 43 tokens original MIT

science-research

790

JamesZor/antigravity

Skill Claude CodeCodex

Answer a question from PRIMARY academic/scientific databases rather than web search. Two families: (a) ALL-DISCIPLINE literature search — arXiv (incl. stats, maths, CS, physics, economics, quant-finance) and OpenAlex (every field, real DOIs + citation counts); (b) domain databases — PubMed, UniProt, PDB, ChEMBL…

not rated 0 2mo ago A 174 tokens original MIT

educational-visual-qa

791

roan2008/visual-qa-mcp

Skill Claude CodeCodex

Verify AI-generated educational visuals for science, engineering, medical education, charts, diagrams, and technical illustrations using structured specs, extraction tools, domain rules, and evidence-backed findings.

not rated 0 2mo ago A 42 tokens

matchbrief-world-cup

792

SpaceGravy/matchbrief-agent

Skill Claude CodeCodex

Get sourced, plain-language World Cup fixture and match-event context from MatchBrief without presenting betting or investment advice.

not rated 0 2mo ago A 28 tokens original MIT

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: