A research workflow for gathering information from multiple sources and producing professional PDF or DOCX reports. It can use papers, scientific databases, and web search for technical and scientific questions.
Plan, execute, monitor, and assess protein/antibody design campaigns. This skill governs how to size a campaign, track run state, coordinate multi-run efforts, estimate cost and time on each compute target (local GPU, HPC, Tamarind), monitor progress, and evaluate campaign health.
Reason about drug repurposing strategies in HCLS — choosing between target-based and phenotype-based approaches, evaluating mechanism-of-action overlap, querying drug-gene interaction databases, assessing clinical translatability, and ranking candidates by evidence strength. Use when the user asks to repurpose a drug…
Use when answering biomedical research questions that need source-backed evidence from local MCP servers, including gene, disease, drug, variant, phenotype, study, or clinical-trial questions.
Prioritize drug targets from a ranked gene list (e.g., scRNA-seq DE output) by orchestrating parallel API queries against UniProt, OpenTargets (with integrated DepMap CRISPR essentiality + gnomAD constraint), PubMed, the Human Protein Atlas (HPA), and ChEMBL tool compounds, then re-ranking by a composite score…
Skill for protein structure prediction and analysis with AlphaFold. Use this skill whenever a user wants to predict or fetch a protein 3D structure, download structures from the AlphaFold Database (AFDB), run ColabFold for novel proteins, parse pLDDT confidence scores or PAE (predicted aligned error) from AlphaFold…
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